Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq566 122 3e-23 >seq566 Length=4904 Score = 122 bits (134), Expect = 3e-23 Identities = 287/413 (69%), Gaps = 29/413 (7%) Strand=Plus/Minus Query 35481 GGCC-GTTGCCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCC-GCACT 35538 |||| |||||| ||||||||||| || ||| || ||| | |||||||| || ||| | Sbjct 3957 GGCCAGTTGCCCGCCTATGCCACTCCAGGCAGCGCCGGCCTCGACCTGCGCGCGTGCA-T 3899 Query 35539 GGAGGCGCCGATGACGT--TGCAGCCGGGCGATGC--GGCG-CTGATTCCCAGCGGCATC 35593 || |||||| | ||| | | || | | || ||| || | |||| |||||| Sbjct 3898 CGACGCGCCG--GCCGTGATCCTCCC---CAACGCCTGGCAACTCGTGCCCACCGGCATT 3844 Query 35594 GCGATCCATCTGGCCGACCCGCAGCTGTGC-GCGGTGATCCTGCCGCGCTCGGGGCTTGG 35652 || ||| ||| ||||| | | | || ||| ||||||| ||||| || || || || Sbjct 3843 GCCATCTGGCTGAAGGACCC-CGGGTACGCCGCGTTGATCCTTCCGCGGTCCGGCCTCGG 3785 Query 35653 CCATCGTCACGGCATCGTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAG 35710 ||| ||||||||||| || |||||| ||| |||||| ||||| ||||||||| Sbjct 3784 CCACAAGCACGGCATCGTGCTGGGCAACCTGGT--CGGCCTGATCGACAGCGATTACCAG 3727 Query 35711 GGGTCGTTGTTGATCAGCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGC 35770 || | || || ||||| |||||| ||| ||| | | ||||||| |||||||| Sbjct 3726 GGCCAGCTGATGGTCAGCTGCTGGAACCGCAGCCCCACGCCCTTCACGCTCGAGCCGATG 3667 Query 35771 GACCGGATTGCGCAGCTGGTGATCCTGCCGGTCGTGC--GCGTAGGCTTGCGAGTGGTGG 35828 || ||| | || ||| |||| ||| | ||||| ||| ||| || || |||| | Sbjct 3666 GAGCGGCTGGCCCAGTTGGTCATCGTCCCGGTGCTGCAGGCGAAG--TTCAACTTGGTCG 3609 Query 35829 AC--ACTTTCGTCGACAGCGCGCGCGGCGCGGGTGGATTCGG-TCACACCGGC 35878 || | | || |||| ||||||||||| ||| || | ||| ||| |||||| Sbjct 3608 ACGAATTCCCGCCGAC--CGCGCGCGGCGAGGGCGGCTACGGCTCA-ACCGGC 3559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149129835183810