Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3158 86.0 5e-12 >seq3158 Length=82937 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || || ||||||||||||||||| | ||| || || Sbjct 52178 ATGCAGATCTTCGTGAAGACCCTGACGGGAAAAACCATTACGTTAGAAGTCGAATCGTCA 52237 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || ||| ||| ||||||||||| | || ||||| Sbjct 52238 GATACCATTGATAACGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 52297 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || |||| || | ||| || || ||| | ||||||| | || | ||||||| ||| Sbjct 52298 CAGCGACTCATCTTTGCTGGAAAGCAACTCGAAGATGGCCGTACGCTTTCCGATTACAAC 52357 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||| || || ||| | ||| |||| ||||||||||| || || || Sbjct 52358 ATTCAGAAGGAAAGCACTCTGCATTTGGTTTTGAGATTGCGTGGTGGTAA 52407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425325954913720