Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2399 201 2e-46 >seq2399 Length=446898 Score = 201 bits (222), Expect = 2e-46 Identities = 356/508 (70%), Gaps = 17/508 (3%) Strand=Plus/Minus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAG 42703 |||||||| |||||||| | |||||| | || || || | || |||| || | Sbjct 271718 AAGAAGGCTGACTGGGCCATTCGATGGATCCA-AGACCAAGAATCCACTTTCGCTCAGCG 271660 Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763 |||||| |||||| | ||||||||||| || |||||| ||| | ||||| ||||| || Sbjct 271659 GCTGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCAGTGGCTCGTTCGCTTCCATTTT 271600 Query 42764 CTGGCTCAAGCAGAAGGTGTCG-ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 |||| | ||| || | ||| ||||| || || ||||||||||| ||||| ||| Sbjct 271599 CTGGTTAAAGAAGCGTG-GTCTTATGCCTGGCCTTACCTTCTCGAATGAACTGATCTCTC 271541 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC-GAGCCACCTCA-GGCA 42880 | |||||||| || || | ||||||||||| ||||| || || | | | ||| || Sbjct 271540 GTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTTTCTCATCTTCGTCACCGCC 271481 Query 42881 CAAGCCCTCGAAGGAGCGG--GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 || |||| | ||| |||| |||||||||||| ||||| || ||||||||||| Sbjct 271480 CAGGCCCGC-------CGGCCGTCCAGGCCATCATCACCGAGGCAGTTGAGATCGAGAAA 271428 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 || ||| | ||| | | || || |||| | || ||||| | ||||||||| Sbjct 271427 GAATTCTTGACGGATGCCCTACCTTGCGCCCTACTTGGAATGAATTCTAAGCTCATGTGC 271368 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 ||||||| ||| ||| || ||| || | |||| | | ||| || | || Sbjct 271367 CAGTACATTGAGTTCGTTGCTGACAGACTACTTGTGGC-CCTTGGTAACAAGAAATTTTA 271309 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | ||| |||||||| ||||| ||||| ||||||| || ||||| ||||| Sbjct 271308 CAACGCCACCAACCCATTCGACTTCATGGACAACATTTCGTTGGCCGGTAAGACGAACTT 271249 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| || | || |||||| Sbjct 271248 CTTCGAGAAGCGTGTTGGTGATTACCAG 271221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944298109440560