Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3158 93.3 3e-14 >seq3158 Length=82937 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33919 ACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CGCTCGTCGTC 33977 |||| ||| || ||||| |||||||||||||||||||| | || || || | || || Sbjct 52386 ACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATC-GGAAAGCGTACGGCCATCTTC 52328 Query 33978 CAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCAT 34037 | |||||| || ||||| || || ||||| ||||| || | | ||||| || Sbjct 52327 GAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTTATCTTG 52268 Query 34038 AATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTTATTGTTTT 34097 ||| ||| ||||| | | | |||| | |||||| ||| | ||| || ||||| Sbjct 52267 AATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAATGGTTTT 52208 Query 34098 TCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| || || || ||||| ||||| ||||| Sbjct 52207 TCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397045554751762