Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2399 141 1e-28 seq944 102 1e-16 >seq2399 Length=446898 Score = 141 bits (156), Expect = 1e-28 Identities = 302/449 (67%), Gaps = 4/449 (1%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||||||||||||||||| ||||| ||| |||| || || ||||| Sbjct 271224 GTAATCACCAACACGCTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCAT 271283 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || |||||||| | | ||| ||| || ||| ||| || || || Sbjct 271284 GAAGTCGAATGGGTTGGTGGCGTTGTAAAATTTCTTGTTACC--AAGGGCCACAAGTAGT 271341 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 | || | ||| |||||||||||| |||| || ||| ||||| || | ||| Sbjct 271342 CTGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGCG 271401 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || || ||| | ||| | ||||| || || || || || | |||||| Sbjct 271402 CAAGGTAGGGCATCCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCC 271461 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCT 126055 || | || | || || | | || | | ||||| |||||| || Sbjct 271462 TGGACGGCCGGCGGGCCTGGGCGGTGACGAAGATGAGAAAAGAGGAGACAGGCAAAGTCG 271521 Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115 |||||||||||||||||| ||||| ||||||||||||||| || || ||||| ||| Sbjct 271522 GTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGA 271581 Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 || |||||||| ||||||||||| | | || || || |||||| || ||||| || Sbjct 271582 CCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACG 271641 Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||| || |||| || |||| ||| || Sbjct 271642 GCCGCAAAGGCAACCAGCCGCTGAGCGAA 271670 >seq944 Length=8805 Score = 102 bits (112), Expect = 1e-16 Identities = 255/379 (67%), Gaps = 14/379 (4%) Strand=Plus/Plus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 || || ||| || ||||| || || || || || ||| ||| || | || ||| || Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAA 10896 |||||||||| || | ||| ||| ||||| || ||||| ||||| || || Sbjct 7559 GGTCGCCGCGACGATGATGATCCCC---TCGTTCGCCTCGAAGCCGTCCATTTCGACCAG 7615 Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTT 10955 || || || | || || ||||| || || || || || | | ||||||| ||| | Sbjct 7616 CAGCTGGTTCAGCGTCTGCTCGCGCTCGTCGTTGCCGTTGCCCAGC-CCCGCACCGCGGT 7674 Query 10956 GCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACG--GTTGATTTTCACGGGC 11013 || ||||||||||| || || |||||||| ||||| |||| | || || ||| Sbjct 7675 GCCGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTT--CTTGGC 7732 Query 11014 AACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATT 11073 ||| || || || || || | |||| || || || || ||||||||||| || | Sbjct 7733 CTGTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGTC 7792 Query 11074 GGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGA 11132 | ||||| || | || || || ||| | |||||||| || || |||||||| | Sbjct 7793 CGAACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGCA 7851 Query 11133 GGGTCTTCCCCGTCCCAGG 11151 | ||||| || || || || Sbjct 7852 GCGTCTTGCCGGTACCGGG 7870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597327607651480