Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq659 291 4e-74 seq1425 259 2e-64 >seq659 Length=20230 Score = 291 bits (322), Expect = 4e-74 Identities = 541/791 (68%), Gaps = 15/791 (2%) Strand=Plus/Minus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 ||||||||||| | | ||||||| ||| || ||| |||| || ||| | ||||| | Sbjct 15301 CCACCGGCTCGCTGGGGCTGGACGTCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 15242 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | | ||||||||||| || || || ||||| ||| | ||| || || || | | | Sbjct 15241 TGATCGAGATCTACGGCCCGGAATCGTCAGGCAAGACCACGCTGACGCTGCAGGTCATCG 15182 Query 66037 CCAATGCCCAGA---AGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCG 66093 || | ||| ||||||| || | ||||| | |||||||||| || | || | Sbjct 15181 CCGAGATGCAGCGCCAGGCCGG---CACCTGCGCCTTCGTCGACGCCGAGCACGCGCTGG 15125 Query 66094 ACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAG 66153 || | ||||||| | ||| || || | | | | || || | ||||| | Sbjct 15124 ACACCCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGAGCTGCTGATCAGCCAGCCGG 15065 Query 66154 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCA 66213 |||| ||||||||||| ||||||||||| ||| || || || |||| || | Sbjct 15064 ACACCGGCGAGCAGGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCCGTCGACC 15005 Query 66214 TCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCG 66273 | ||||| | ||||| |||||||| |||||||| ||| ||| |||| || || || | Sbjct 15004 TGATCGTCATCGACTCGGTGGCGGCGCTGGTGCCCAAGGCCGAGATCGAGGGCGAGATGG 14945 Query 66274 GGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCG 66333 | || |||| ||||||||| |||||||| ||| ||||| |||||||||| |||| Sbjct 14944 GCGATTCGCTGCCCGGCCTGCAGGCCCGCCTCATGAGCCAGGCGCTGCGCAAGCTCACCG 14885 Query 66334 GCACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGA 66390 |||||| | ||||| || | ||| | | | || ||| | ||| ||||| Sbjct 14884 CCACGATCAAGAAGACCAACTGCATGGTCA---TCTTCATCAACCAGATCCGCATGAAGA 14828 Query 66391 TCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCT 66450 |||| |||| | |||| |||||||||||||| || || || ||| |||| Sbjct 14827 TCGG---CGTGATGTTCGGCAGCCCCGAGACCACCACCGGCGGCAATGCGCTGAAGTTCT 14771 Query 66451 ACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTG 66510 |||| || ||||| |||| ||||| | | || |||| ||| | ||||| ||||| Sbjct 14770 ACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGAGGAGGCGA 14711 Query 66511 TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGG 66570 |||||||| || || ||||| |||||||||||| ||||||| ||| | || Sbjct 14710 TCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTGGCGCCCCCGTTCAAGACGG 14651 Query 66571 CTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACATGG 66630 | ||||| |||| | | |||||||||||| || ||||| | || || ||||||||| Sbjct 14650 CGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCGAAGGCGAGGTCATCGACATGG 14591 Query 66631 CCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACA 66690 ||| | | ||||| ||||||| || ||||||| | ||| || | |||| | Sbjct 14590 GCGTCAACGCCCGCATCATCGAGAAGTCCGGCGCCTGGTACGCCTACAAGGGCGAGAAGA 14531 Query 66691 TCGGCCAGGGC 66701 ||||||||||| Sbjct 14530 TCGGCCAGGGC 14520 >seq1425 Length=4117 Score = 259 bits (286), Expect = 2e-64 Identities = 507/746 (68%), Gaps = 5/746 (1%) Strand=Plus/Plus Query 65934 CTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGT 65993 || ||| ||| |||||| |||| || || | |||||| | || ||||||| ||| Sbjct 2586 CTCGACATCGCGCTCGGCGTCGGCGGCCTGCCCAAGGGCCGTATCGTCGAGATCTTCGGC 2645 Query 65994 CCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAATGCCCAGAAGGCC 66053 || || || || || ||| | ||| | ||||||||| | ||| | | || ||||| Sbjct 2646 CCCGAATCCTCGGGCAAGACGACGCTCGCGCTCCACGCGATCGCCGAATCGCAAAAGGCT 2705 Query 66054 GGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG 66113 || |||| ||| || | | |||||||||| || | ||||| || | || ||| | | Sbjct 2706 GGCGGCACCGCGGCGTTCGTCGACGCCGAGCACGCGCTCGATCCCGCTTATGCCAAGAAG 2765 Query 66114 CTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTG 66173 || || || | ||||| | || | || |||||| || || ||||||||||| || Sbjct 2766 CTGGGCGTCAACATCGACGAACTGATCGTCTCGCAGCCCGATACCGGCGAGCAGGCGCTT 2825 Query 66174 GAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTG 66233 |||||||| ||| |||||| || || | | | | | || || || || || Sbjct 2826 GAGATCGTCGACACGCTCGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTC 2885 Query 66234 GCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTG 66293 || || || |||||||| || || |||| || || || || ||| ||||||||||| Sbjct 2886 GCCGCGCTCGTGCCGCGCGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTT 2945 Query 66294 CATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAAC 66353 || || ||||||||| ||||| |||||||||| ||||||||||| | | | ||| Sbjct 2946 CAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTTACCGGCACGATCAGCCGGTCGAAC 3005 Query 66354 ACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCG 66413 ||| | | | | || || | ||| ||||||||| |||| |||||| || Sbjct 3006 TGCCTCGTCATCTTCATCAACCAAATCCGCATGAAGATCGG---CGTGATGTACGGCTCG 3062 Query 66414 AATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTC 66473 || || || ||||| || || || ||| |||||||| || || ||| | || || Sbjct 3063 CCCGAAACGACGACCGGCGGCAATGCGCTGAAATTCTACGCGTCCGTCCGTCTCGACGTG 3122 Query 66474 CGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAG 66533 ||| | |||| | | | ||||| |||| || || |||||||| || ||||||||| Sbjct 3123 CGCCGCATCGGCTCGGTCAAGGACCGCGAGGAAGCGACCGGCAACCAGACCCGCGTGAAG 3182 Query 66534 GTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGC 66593 || || ||||||||| | ||||| ||| | |||| || || |||| | | ||| Sbjct 3183 GTGGTGAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTTCGGT 3242 Query 66594 GAGGGCATTTCC-CGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAA 66652 |||||||||||| || ||| || || ||||| | | ||| || || || | Sbjct 3243 GAGGGCATTTCCAAGCTGGGC-GAGATCATCGACCTCGGCGTGAAGGCCGGCCTGGTCGA 3301 Query 66653 GAAGTCTGGGGCCTGGTTCAAGTACG 66678 |||||| || ||||||||| |||| Sbjct 3302 GAAGTCGGGCTCCTGGTTCAGCTACG 3327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242460113269052