Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3224 149 6e-31 >seq3224 Length=193136 Score = 149 bits (164), Expect = 6e-31 Identities = 310/460 (67%), Gaps = 4/460 (1%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || ||||| |||||||| || |||||||||| |||| |||||||| || Sbjct 109745 CCCACTCTTTTCAATGCGGGGACGCCACAGCCACAGATGGCTTCCTGTTTCCTCATTGAT 109804 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| || |||| ||| |||| || | |||||| |||||| || || Sbjct 109805 ATGAAGGAAGATAGCATCGACGGTATTTATGATACCCTCAAAACCTGTGCCCTGATTTCC 109864 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACA 94075 ||| || || || || || | | ||| || |||| ||||| | |||||||||| Sbjct 109865 AAAACAGCTGGTGGTATTGGTCTTAATGTTCAT--CGTATCCGTGCGACTGGTTCCTACA 109922 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | || || |||||| ||||||| || |||| |||||||| || ||||| |||||| Sbjct 109923 TTGCAGGAACGAATGGCTCCTCCAATGGGATCGTTCCTATGCTTCGTGTCTTTAACAACA 109982 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||| || || ||||| | | || ||| | ||||| ||||||| | Sbjct 109983 CCGCTCGATACGTCGATCAAGGTGGCAATAAGCGGCCAGGTGCCTTCGCCATCTATCTTG 110042 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 | || |||||| | || | | || | || || || ||||||||||| || || Sbjct 110043 AACCTTGGCACTCCGATATTTTCGAGTTTCTGGATCTTCGTAAGAACCACGGAAAGGAGG 110102 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 | ||| ||| | || || ||| ||||| ||| || || | || |||||||| | Sbjct 110103 AAGTGAGAGCCCGTGATCTTTTCCTTGCTCTTTGGACTCCCGATTTGTTCATGAAACGGG 110162 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 | ||| | ||| | |||| | || ||||| ||||| Sbjct 110163 TTGAGCAGAACGGTGAATGGACATTGTTCTGTCCTAATGA 110202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494701673356760