Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq234 239 1e-58 seq1710 91.5 4e-14 >seq234 Length=15970 Score = 239 bits (264), Expect = 1e-58 Identities = 590/882 (67%), Gaps = 31/882 (4%) Strand=Plus/Plus Query 8582 CAGTGACTTCCCGGTGCTGCTCGAAAGCACGATGCACAAGGCACTGCAGGCGGCCTACGC 8641 ||| |||||||| |||||| |||||| | |||| ||| | || |||||||| ||||| Sbjct 9447 CAGCGACTTCCCCGTGCTGTTCGAAAACGCGATCCACCGCACGCTTCAGGCGGCGTACGC 9506 Query 8642 CGTTGCGCCGGACACCTGGTCCCGCTGGTGCGTCACCGGCACCGTCAGTGATTTCCGCGA 8701 | |||||||||| ||||| |||| |||| |||||||| || | || |||||||| Sbjct 9507 CACCACGCCGGACACGTGGTCGCGCTTTTGCGGTACCGGCACGGTGACCGACTTCCGCGA 9566 Query 8702 GCATTCGCGCTACC-GCGTGGGCAGCATTGGCAACCTGGACAAGCTGACCGAGGCTGGCG 8760 || ||||||| ||| || | | || || ||||| | | |||||| |||| Sbjct 9567 TCACAGCCGCTACCTGCGCGGCTCGT-TCGGGGCGCTCGACAACGTCAACGAGGCCGGCG 9625 Query 8761 AGTTCAAGAACAAGAAGATCCCGGACGGCGAGAAGGCAACCATCACCGCTGGCACCAAGG 8820 |||||||||||||| |||||| ||| | ||||| | ||| ||| || |||| Sbjct 9626 AGTTCAAGAACAAGCCGATCCCCGACTTGGCGAAGGAGAAGATCCGCGCGACGACGAAGG 9685 Query 8821 GCAACACCATCAACCTGACGCGTCAGGCGATCATCAACGACGACCTGGGTGCGTTCCTCG 8880 |||||| |||||||||| | || ||||||||| |||| |||||| ||| | |||| || Sbjct 9686 GCAACATCATCAACCTGTCTCGGCAGGCGATCGTCAATGACGACATGGAGGTGTTCTCCG 9745 Query 8881 GCTTGGCGACCGCCTTCGGTCGTGCCGCAAAGCGGACCATTGAGGCCGACGCGTATGCGT 8940 || | || || | |||| || || || |||| ||| || ||| ||||| | || Sbjct 9746 GCCTTGCCGTCGACCTCGGCCGCGCGGCCAAGCTGACGATCGAGATCGACGTTTTCGCCC 9805 Query 8941 TCCTCGCCAGCAATCCGAAGCTGGATTCCAACAAGACGCTGTTCCACGCCGACCACGGCA 9000 || || |||||| ||| | || || | | ||||||| |||||| ||||||| Sbjct 9806 TCATCAACAGCAACCCGCTGATGAATGATGGCGTGGCGCTGTTTGACGCCGCGCACGGCA 9865 Query 9001 ACAT--CCTG-GCGGCAGCGGTGCCGAGCGTCACCTCGGTCGACGCGATGCGCGTCCGGC 9057 || | || | |||| || | ||| ||| | || |||| ||||| ||||| ||| Sbjct 9866 ACCTTGCCGGCGCGGGCGCCGCCCCGTCTGTCGCGGCGTTCGATGCGATCCGCGT--GGC 9923 Query 9058 --TGGCCCAGCAGAAGGACGTGGGCGGGAATGATGTGCTGGATCTGTCGCCGGCACTCTG 9115 |||| ||||||||| | |||| || || || ||| | ||| | ||| | Sbjct 9924 AATGGCGTCGCAGAAGGATCTCAGCGGCAACGAATATCTCGATAT----CCGCCCCTCGG 9979 Query 9116 GCTCGGTCCGACCAAATAC----GGCAGTGCCGCGCGTGTCACCAACAAGGCCGAGTACG 9171 | | | | |||| | ||| | | ||| | | |||| || | |||||| Sbjct 9980 TCCTGCTGCTTCCAATCGCGCTGGGCGGCGGCGCCAGGATTCTCAACCAGAGCCAGTACG 10039 Query 9172 ACCCGGACGC--TGAAGGGAAGCTGCAGCGCCCGAACGCTGTGCAGGGTCTCTTCCGCGA 9229 | || ||||| |||| ||||| ||||| |||||| || || | ||| || Sbjct 10040 ATCCCGACGCCGTGAA--CAAGCTTCAGCGGCCGAACATCGTCGCCGGCATGTTCTCGGA 10097 Query 9230 CATCGTCGACACCGCGCGCAT--CAAGGACGACAAGTGGTACCTGTTCGCCGATCCGAAC 9287 |||||||||||| ||||| | || | || || | ||| ||||| || |||||| Sbjct 10098 CATCGTCGACACGCCGCGCTTGGCAGGCACCGCA--TACTACGCCTTCGCGGACCCGAAC 10155 Query 9288 GACTGTCCGGCCATCGAGGTCGCATTCCTTGATGGGATCACCGAACCCTTCCTGGACTAC 9347 | | ||||| |||||||| | ||||| | || | |||||| || ||| ||| | Sbjct 10156 GTCGCGCCGGCGATCGAGGTGGTGTTCCTCAACGGCAACACCGAGCCGTTCACCGACAGC 10215 Query 9348 GAGGAGGGGTTCACCGTCGACGGTGTGCGTTGGAAGGCACGCCTCGATTTCGGCATCGCC 9407 |||| || | ||| || || || ||||||| |||| ||| | |||| ||| | Sbjct 10216 CAGGACGGCTGGCGCGTGGATGGCGTCGAATGGAAGGTTCGCCACGACTACGGCGTCGGC 10275 Query 9408 GCCCTCGACTATCG--CGGCGT----GCAGCGCTGCGGCTGA 9443 || | ||| || |||||| ||||| | ||| |||| Sbjct 10276 GCGGTGAACTTCCGCTCGGCGTTCAAGCAGCCCGGCGCCTGA 10317 >seq1710 Length=5225 Score = 91.5 bits (100), Expect = 4e-14 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 29552 CCAAGGAGACATCCGGGTACAGGCCGATCGAAAGCAGCTTCTCCTTGCCGGCGATGCGGT 29611 ||||| ||| || || || | || | || ||| ||||||||||||| || | ||| | Sbjct 3069 CCAAGCTGACGTCGGGATAGGGCCCAAACGTCAGCCGCTTCTCCTTGCCCGCAAAGCGAT 3128 Query 29612 ACTTCCAGCGCCAGCTGCGCGCACCGGTCGGGGTGAGATAGAGGTACAGGCCGCCACCGT 29671 ||||||| ||||||||||| || || || || | |||||||| || ||| |||| Sbjct 3129 ACTTCCATCGCCAGCTGCGAAAGCCCGTTGGAGTCACGTAGAGGTAGAGCCCGAAGCCGT 3188 Query 29672 CGGTGATCTTCTGCGGTTTGTCGCTGGGCTTGGCGCGCCTGATGGCTGCG-TCGGTCAGA 29730 | | | ||| | |||||| ||| || ||| || || || ||| ||| |||||||| Sbjct 3189 CCGCCAGCTTGTACGGTTTTTCGGTGCCCTTCGCCTGCTTGCAGGC-GCGATCGGTCAGG 3247 Query 29731 GGCA 29734 |||| Sbjct 3248 GGCA 3251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128791475942778