Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq3158 111 1e-19
seq3102 84.2 2e-11
>seq3158
Length=82937
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || || | || | ||||| || || ||||||||||| ||||| ||
Sbjct 51774 CCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAG 51715
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| ||| ||| || || ||||| || ||| ||||||| |||||||| || || ||
Sbjct 51714 AGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGA 51655
Query 127007 ATGCCCTCCTTGTCCGTGATTTTC-TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| |||||| | || |||| || | ||||| | || ||
Sbjct 51654 ATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTG-TCAATTGTGTCGGAGGATTCAAC 51596
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||| |||||||| | ||||| || |||||||||||
Sbjct 51595 TTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || || | || | ||||| || || ||||||||||| ||||| ||
Sbjct 52176 CCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAG 52117
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| ||| ||| || || ||||| || ||| ||||||| |||||||| || || ||
Sbjct 52116 AGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGA 52057
Query 127007 ATGCCCTCCTTGTCCGTGATTTTC-TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| |||||| | || |||| || | ||||| | || ||
Sbjct 52056 ATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTG-TCAATTGTGTCGGAGGATTCAAC 51998
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||| |||||||| | ||||| || |||||||||||
Sbjct 51997 TTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || || ||||||||||| || || ||| || |||||| || ||
Sbjct 51224 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTCG 51165
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || ||||| ||||||| || ||||| || ||||| ||||||||||| ||| |
Sbjct 51164 AGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGG 51105
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| || ||| | | |||| || || || ||| || |||| || | || ||
Sbjct 51104 ATCTTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGGTCTTT 51045
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115
|| |||| || || || |||||||||||||
Sbjct 51044 CCTGTCAAGGTCTTGACGAAAATCTGCATGG 51014
>seq3102
Length=369104
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
||||| || || ||||||| || || ||| || || ||||| ||||| || | |||
Sbjct 110036 TTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAATC 110095
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
||||||||||| || || || ||||||||||| ||| ||| || || | | |||
Sbjct 110096 AATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGTCG 110155
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| ||||| | |||||| || | ||| | || |||||||| || || || || ||
Sbjct 110156 ATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAA 110214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475480109771440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |