Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq1349 136 2e-27 seq1247 100 1e-16 >seq1349 Length=8317 Score = 136 bits (150), Expect = 2e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 |||||||||||||||||| |||||| |||||||||| ||||| ||||| || | || Sbjct 7589 CATGGCATCCGTCAACAAGGTCATCATCGTCGGCAACCTCGGGAAGGACCCCGAGATGCG 7648 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAA 9229 | | |||| ||||||| ||| ||| || |||| || ||||| |||| || Sbjct 7649 CACCTTCCCCAGCGGCGGGCGGGTCTGCAACGTCACCATCGCCACCACCGAGCGCTGGAA 7708 Query 9230 GGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGG 9289 ||||||| |||||||||| | ||||| |||| |||||||||||||| | ||| | Sbjct 7709 GGACAAGCAGAGCGGCGAGATGAAGGAGCTGACGGAGTGGCACCGCGTGGTCTTCAATGA 7768 Query 9290 CCGCCTCGCCGAGAT 9304 |||||| |||||||| Sbjct 7769 CCGCCTGGCCGAGAT 7783 >seq1247 Length=8953 Score = 100 bits (110), Expect = 1e-16 Identities = 208/304 (68%), Gaps = 17/304 (6%) Strand=Plus/Plus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 ||| ||||| || || ||||||||||||||||| ||| || ||| | |||| ||| Sbjct 8246 CGTTAACAAGGTTATTCTCGTCGGCAATCTCGGGCGCGATCCCGAATCGCGCTCGTTCCA 8305 Query 9179 GAGCGGCGACGCAATCTCC--AATATCCGTCTCGCGACGACCGATCGCTACAAGGA---C 9233 || ||||| |||| | || | || ||||||| | ||| ||| ||||| | Sbjct 8306 GAACGGCG--GCAAGGTGGTGAACCTGCGCATCGCGACCAGCGAAAGCTGGAAGGATCGC 8363 Query 9234 AAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCC-- 9291 || || |||||| ||||||| ||||| ||||| ||||| ||||| | Sbjct 8364 AATTCG---GGCGAGCGCAAGGAAAAAACCGAATGGCATTCGGTCGCGATCTTCAACGAA 8420 Query 9292 GCCTCGCCGAGATCGTCGACGAGCAC---CTTCGCAAGGGCGCATCGGTCTACATCGAGG 9348 | || | ||| ||| | ||||| | || |||||||| | |||||| ||||||| Sbjct 8421 GGCTTGGCGAA--CGTGGCCGAGCGCTTCCTACGCAAGGGGTCGAAGGTCTATATCGAGG 8478 Query 9349 GGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGA 9408 | | | |||| || || ||||||||||| |||||||| ||||| |||||||| Sbjct 8479 GCCAGCTGCAGACCCGCAAATGGCAGGATCAGAATGGCCAGGACCGCTATTCGACCGAGG 8538 Query 9409 TCGT 9412 |||| Sbjct 8539 TCGT 8542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200554691168916