Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq1148 149 2e-31
seq3011 91.5 4e-14
seq1423 86.0 2e-12
>seq1148
Length=21331
Score = 149 bits (164), Expect = 2e-31
Identities = 504/769 (66%), Gaps = 22/769 (3%)
Strand=Plus/Minus
Query 8374 ATCACCGGAACGCCGACCGGATTTGTCGACTTAGAC-GCGCGACTCGACGGTATGCATGG 8432
|||||||| ||| | ||| || |||| | ||| || ||| | ||| |||| ||
Sbjct 12501 ATCACCGGCGTGCCCAGCGGCTTCCACGACCTGGACCGCATGAC-CTCCGGCCTGCAGGG 12443
Query 8433 CGGTGAGTTGATTATCGTCGGCGGACGGCCGT-CGATGGGAAAGACCTCCCTCGCAATGA 8491
||| || | || ||| | ||||| | ||| | ||||||| |||||||| || || || |
Sbjct 12442 CGGCGACCTCATCATCCT-GGCGGCCCGCCCTTCGATGGGCAAGACCTCGCTGGCCATCA 12384
Query 8492 ATATCGCAGAGCATGTCGCCATCGTGTCGA--GATTGCCCGTCGGCGTCTTGTCGCTGGA 8549
| ||||| ||||| || ||| || ||| | ||||||||| ||| || || ||||
Sbjct 12383 ACATCGCCGAGCACGTGGCCCTCAA--CGAAGGCCTGCCCGTCGCCGTGTTCTCCATGGA 12326
Query 8550 AATGCCGACCGAACAGTTGACCATGCGCATGCTGGCGTCGACATC--CCGTATCAGCCAA 8607
|||| | ||| || | |||| || | | || |||| ||| ||| |||
Sbjct 12325 AATGGGCGCTTCGCAGCTGGCGGTGCGTATCGTCGGTTC--CATCGGCCGGATCGACCAG 12268
Query 8608 AACAGGCTGCGAACCGGTCGCCTCGAGGATGACGACTGGCCGCGCCTGACGCGTGGCGTC 8667
| | || || ||||| |||||| || ||||| |||||||||||||| | | |
Sbjct 12267 ACCCACCTTCGCACCGGGCGCCTCACCGACGACGAGTGGCCGCGCCTGACCGAAGCCATT 12208
Query 8668 GAGCTGATGGCCGACGCGCCCGTGCATATTCTCGATAGCTCCGCGATCACCCCGT-CGAA 8726
||| | || | || || |||| || ||| | | | | || | |||
Sbjct 12207 GAGAAGCTGCGCAACATTTCCCTGCACATCGACGAGACGCCAGGCCTGACGGTGAGCGAG 12148
Query 8727 ATTCAAGTCCGAGTTGCGGCGCTTGTATCGCGAATGCGGCCG---GCTCGGGATGATTGT 8783
| | | || | | ||| || || ||| | |||||| | ||| || |||| ||
Sbjct 12147 TTGCGCG-CCAACTCGCGCCGGCTGGTGCGCCAGTGCGGCGGCAAGCTGGGCCTGATCGT 12089
Query 8784 CGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCG--GATCT--GAAATGCGGGCCA 8839
|| |||||||||||||| ||| | ||| | ||| || | || | || ||||
Sbjct 12088 GGTGGACTACCTGCAGCTCATGA-GCGTGTCCTCGGGCATGAGCGACGAGAACCGCGCCA 12030
Query 8840 CCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGA 8899
||| ||| | ||| || || || | || || | || |||||||| | | |||
Sbjct 12029 CCGCGGTGGGCGAGATCTCCCGTGGCCTGAAGGCGCTGGCCAAGGAACTGGGCTGCCCGG 11970
Query 8900 TCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCA 8959
| ||||||||||||||||| || || | ||| ||| | ||||||| || | |
Sbjct 11969 TGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCGACAAGCGCCCGATGA 11910
Query 8960 TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCT 9019
|| ||| |||||||| ||||| || ||||||||||| |||||||| ||| | || ||||
Sbjct 11909 TGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACGTCATCATGTTCATCT 11850
Query 9020 ACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTG 9079
||||||| || ||| ||| ||| | || | ||| |||||| | |||||
Sbjct 11849 ACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGGCCGAGGTGATCATCA 11790
Query 9080 CGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATTCCAGAA 9128
|||||||| || || || | || ||||| ||| || |||| |||
Sbjct 11789 GCAAGCAGCGGAATGGCCCCACCGGGACCGTCAAGCTGGCCTTCCTGAA 11741
>seq3011
Length=6182
Score = 91.5 bits (100), Expect = 4e-14
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 38064 GTCGCGGGCATCTGGCGTGCGTGGCGTGGCGCCGACGGTGTCGAGACGCTCGCGATGGCG 38123
||||| ||||||||||| ||||||| ||||||| |||| ||| | ||
Sbjct 5509 GTCGCCGGCATCTGGCGCCCGTGGCGCCATCCCGACGGCCGCGAGGTCCTCAGCTTCGCC 5568
Query 38124 ATGCTGACGGTGAACGCCGACGAGCACCCGGTGATGAAGCACATGCACCGCCTCGGCGAC 38183
||||| || |||||||| ||||| || ||| ||||||||| | | || || | || |||
Sbjct 5569 ATGCTCACCGTGAACGCGGACGACCATCCGCTGATGAAGCGCTTCCATCGGCCCGAGGAC 5628
Query 38184 GAGAAGCGATCGGTCGTGATCCTGCGTCCGGCCGACTATGACGAGTGGCT 38233
|||||||| ||| |||||||| ||| | ||||| | | | |||||
Sbjct 5629 GAGAAGCGGATGGTGGTGATCCTCGATCCCGAGGACTACGGCAACTGGCT 5678
>seq1423
Length=4330
Score = 86.0 bits (94), Expect = 2e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 35458 GGTCGAGGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATCGCGTCGTTCAGCA 35517
||||||||||||||||||| | ||||| | |||||||| ||||||||| | |
Sbjct 2445 GGTCGAGGTGATCAACGACCTGTCGGGCGACGTCGCCAACCTGTTTCGCGTCGTGCGCCG 2504
Query 35518 TCACCTCGAGGAATTCGTGCGGC-AGTTCAAATGGGCGCTCACCAGTCGGCAGGTGTTCG 35576
||| ||| ||||| || | |||||| ||| |||| || ||||| | | |||||
Sbjct 2505 GCACTATGAGCCGTTCGT-CGACGAGTTCACCTGGCTGCTCGCCGGTCGGGACGAGTTCG 2563
Query 35577 AGTGGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTGCGGCGCGGTTCT 35636
|| | | ||||| || ||| ||||||||||| ||| |||| || | || |||
Sbjct 2564 AGCGACAGAAGCGCGTGGATCCGTCGACGCTCACCGATATCGAGCGCGCCGTCCGCTTCC 2623
Query 35637 ACTATCTGCAG 35647
||| ||||||
Sbjct 2624 TCTACCTGCAG 2634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127540327663476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |