Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2399 123 3e-23 seq944 102 1e-16 seq3224 93.3 5e-14 seq1437 86.0 8e-12 >seq2399 Length=446898 Score = 123 bits (136), Expect = 3e-23 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||||||||||||||| ||||| ||||||||||||||| || || Sbjct 271513 GCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCA 271572 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| ||||| |||||||| ||||||||||| | | || |||||| |||||| || Sbjct 271573 GGCATAAGACCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATA 271632 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCT 127670 ||||| || ||| || |||| || |||| Sbjct 271633 CCCTCGACGGCCGCAAAGGCAACCAGCCGCT 271663 >seq944 Length=8805 Score = 102 bits (112), Expect = 1e-16 Identities = 255/379 (67%), Gaps = 14/379 (4%) Strand=Plus/Plus Query 12695 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 12754 || || ||| || ||||| || || || || || ||| ||| || | || ||| || Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 12755 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCAGTCAA 12811 |||||||||| || | ||| ||| ||||| |||||||| ||||| || || Sbjct 7559 GGTCGCCGCGACGATGATGATCCCC---TCGTTCGCCTCGAAGCCGTCCATTTCGACCAG 7615 Query 12812 GAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTT 12870 || || || | || || || || || || || || || | | ||||||| ||| | Sbjct 7616 CAGCTGGTTCAGCGTCTGCTCGCGCTCGTCGTTGCCGTTGCCCAGC-CCCGCACCGCGGT 7674 Query 12871 GCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACG--GTTGATTTTCACGGGC 12928 || ||||||||||| || ||||| ||||| ||||| |||| | || || ||| Sbjct 7675 GCCGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTT--CTTGGC 7732 Query 12929 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 ||| || || || ||||| | |||| || || || || ||||| ||||| || | Sbjct 7733 CTGTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGTC 7792 Query 12989 GGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGA 13047 | ||||| || | || || || ||| | |||||||| || || |||||||| | Sbjct 7793 CGAACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGCA 7851 Query 13048 GGGTCTTCCCCGTCCCTGG 13066 | ||||| || || || || Sbjct 7852 GCGTCTTGCCGGTACCGGG 7870 >seq3224 Length=193136 Score = 93.3 bits (102), Expect = 5e-14 Identities = 394/617 (64%), Gaps = 9/617 (1%) Strand=Plus/Minus Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 ||||| ||||||||||| ||||| | || | | |||||| |||| || |||||| Sbjct 110250 TAGAGAGCCTCAAACTCATCACCGTAGACATCGGCCAACCCTGGCGCCTCATTAGGACAG 110191 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || | | ||||| ||| || ||||||||| |||||||| | || || |||| || Sbjct 110190 AACAATGTCCATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGA 110131 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || ||| ||||| || | |||| || | || || || ||| | |||| | Sbjct 110130 GCAAGGAAAAGATCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGA 110071 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC----G 116903 || || | ||||| | |||||| ||||| || || | |||| | | ||| || Sbjct 110070 AACTCGAAAATATCGGAGTGCCAAGGTTCAAGATAGATGGCGA-AGGCACCTGGCCGCTT 110012 Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 | ||| | || | || || | || || |||||| || |||||||| |||| ||| Sbjct 110011 ATTGCCACCTTGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGAACGAT 109952 Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGG 117021 |||| || |||||| || || || || || || | | || | || | || Sbjct 109951 CCCATTGGAGGAGCCATTCGTTCCTGCAATGTAGGA-ACCAG-TCGCACGGATACGATGA 109894 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 | | | ||||||||| || || || || || | || || |||| | | Sbjct 109893 ACATTAAGACCAATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCA 109834 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 || || || ||||| || |||| | | |||||||| ||| | ||| |||||| Sbjct 109833 TAAATACCGTCGATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGTGGC 109774 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 117201 ||| || || || ||||| || || || | || || |||| | ||||||||| Sbjct 109773 TGTGGCGTCCCCGCATTGAAAAGAGTGGGAGAAGCATGAGTGAAAAATTTCTGGGACATC 109714 Query 117202 TTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGC 117261 || |||||||||| || || || |||||||| || | | || ||| Sbjct 109713 AAATTATAGGTCTCCATCGTTTTCTCGATATCCTCGCCGTGAATGCCAACGGCAACACGC 109654 Query 117262 ATAAACATGTATTGGGG 117278 || | ||||| |||||| Sbjct 109653 ATGATCATGTGTTGGGG 109637 >seq1437 Length=11314 Score = 86.0 bits (94), Expect = 8e-12 Identities = 275/425 (65%), Gaps = 4/425 (1%) Strand=Plus/Minus Query 12644 GTGGACACCCAAAATCTTCTCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACG 12703 |||||| || |||| |||||| ||||| | || || |||| || || || Sbjct 9566 GTGGACGTTCAGGATCTGCTCGCGGCCGCGGATGTCCGGCAGCTGCACGTAGACCTGGCG 9507 Query 12704 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 12763 || ||||| || ||||| || |||||| |||| ||||| || |||||| || || || Sbjct 9506 GTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCGGC 9447 Query 12764 GATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823 | || | | |||| | | | |||||||| |||||||| || | || |||| Sbjct 9446 CACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTGAG 9387 Query 12824 GGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 12881 ||| || || || || || || || | ||| || || | || || ||||| Sbjct 9386 GGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGACC 9329 Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 12941 ||||| || || || ||||| | ||| || || || | ||| || || || Sbjct 9328 GCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACATG 9269 Query 12942 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACAT 13001 || ||||| | || ||||| || || ||||||||||| || | || | | || Sbjct 9268 TCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGATG 9209 Query 13002 TGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 13061 || ||| || || |||| || || |||||| | ||| || || ||||| || ||| Sbjct 9208 CTGAAGAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCGGTC 9149 Query 13062 CCTGG 13066 || || Sbjct 9148 CCCGG 9144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613480504767960