Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2399 136 6e-27 >seq2399 Length=446898 Score = 136 bits (150), Expect = 6e-27 Identities = 325/487 (67%), Gaps = 11/487 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||| ||||| || ||| || || |||||||| |||||||||| Sbjct 271239 CTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCATGAAGTCGAATGGGTT 271298 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| || ||| || || ||| | || | ||||| || || || || Sbjct 271299 GGTGGCGTTGTAAAATTTCTTGTTACCAAGGGCCACAAGTAGTCTGTCAGCAACGAACTC 271358 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG--CCTAACGGGGAGCGCTTCC 159826 ||||| ||||| ||| | | || || || || || | || || || || ||| Sbjct 271359 AATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGCGCAA--GGTAGGGCATCC 271416 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGTA 159885 | || || || ||||| ||||| || || ||||| | || | ||| | || Sbjct 271417 GTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCCTGGACGGCCGGCGGG 271476 Query 159886 CCCCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 || ||| || | || ||| | ||| ||||| || ||||||||| ||| || | Sbjct 271477 CCTGGGCGGTGACGAAGATGAGA-----AAAGAGGAGACAGGCAAAGTCGGTGTGGAGAC 271531 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| |||||||| | || || || | | | ||||| ||||| | |||||| | Sbjct 271532 CCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGACCACGCTTCT 271591 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 | | ||| ||||||| || || | || || || || || ||||| ||||||||||| | Sbjct 271592 TTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACGGCCGCAAAGG 271651 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 | || |||| || | | |||| || | ||| ||| |||| | ||||||| |||| Sbjct 271652 CAACCAGCCGCTGAGCGAAAGTGGATTCTTGGTCTTGGATCCATCGAATGGCCCAGTCAG 271711 Query 160125 CCTTCTT 160131 ||||||| Sbjct 271712 CCTTCTT 271718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795120600809360