Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3158 120 7e-22 seq599 87.8 4e-12 >seq3158 Length=82937 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || || ||||| | ||||||||||| | |||| |||||| Sbjct 51759 AGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCT 51700 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || ||||||||||| | ||||||||||| || |||||| || || Sbjct 51699 TCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 51640 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || || ||| || | ||||| | | ||| || || |||||||||||| Sbjct 51639 TGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTC 51580 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | |||||||| ||||| || Sbjct 51579 TTGCCGGTTAAGGTTTTCACGAAAATCTG 51551 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || || ||||| | ||||||||||| | |||| |||||| Sbjct 52161 AGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCT 52102 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || ||||||||||| | ||||||||||| || |||||| || || Sbjct 52101 TCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 52042 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || || ||| || | ||||| | | ||| || || |||||||||||| Sbjct 52041 TGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTC 51982 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | |||||||| ||||| || Sbjct 51981 TTGCCGGTTAAGGTTTTCACGAAAATCTG 51953 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| ||||| || || || |||| ||| || || | | ||| Sbjct 51540 CGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTG 51481 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || |||||||| | ||| |||||||| ||| ||| || Sbjct 51480 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCC 51421 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||| |||| ||| || | | || || || | Sbjct 51420 TCCTTATCCTGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAACCTCTAGG 51361 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || || || || || || Sbjct 51360 GTGATGGTCTTTCCTGTCAGGGTCTTGAC 51332 >seq599 Length=174198 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||||| |||| ||| || || | | || | || ||| Sbjct 69523 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGAGAGGGTGCGGCCGTCT 69582 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||| || ||||||||||||||||| |||||||| || Sbjct 69583 TCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGG 69623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178869019728227