Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3158 120 3e-22 seq3102 107 2e-18 >seq3158 Length=82937 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || ||||| || || |||||||| || ||||| |||| |||||||||||||| || || Sbjct 51206 TCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAG 51147 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||||||| |||||||| | || | || |||||| ||| |||||| |||| | | Sbjct 51146 ATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGTCTTAACATTG 51087 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||||| || ||||| || | |||||||| || || |||| || || || Sbjct 51086 TCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTGACG 51027 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 51026 AAAATCTGCAT 51016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| || ||||| || |||||||| || || || || | || || Sbjct 51756 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 51697 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || || ||||||||||| ||||| ||||||||||| | || | | ||||||||| Sbjct 51696 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 51637 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || ||| | || | ||| | | | |||||| ||||| || || | |||||| || || Sbjct 51636 ATTTTCGTTTTTA-CGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTT 51578 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | ||||| || || || ||||| Sbjct 51577 GCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| || ||||| || |||||||| || || || || | || || Sbjct 52158 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 52099 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || || ||||||||||| ||||| ||||||||||| | || | | ||||||||| Sbjct 52098 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 52039 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || ||| | || | ||| | | | |||||| ||||| || || | |||||| || || Sbjct 52038 ATTTTCGTTTTTA-CGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTT 51980 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || | ||||| || || || ||||| Sbjct 51979 GCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 >seq3102 Length=369104 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||| || || ||| | ||| || |||| ||||||||||| ||||| || | Sbjct 110034 CCTTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAA 110093 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | || |||||| ||| |||||| | || | | Sbjct 110094 TCAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGT 110153 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||||||| || || || | |||||||| ||||| || || || || || | Sbjct 110154 CGATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 110213 Query 46584 AG 46585 || Sbjct 110214 AG 110215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565213805064120