Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3158 95.1 8e-15 >seq3158 Length=82937 Score = 95.1 bits (104), Expect = 8e-15 Identities = 174/252 (69%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 39470 AACAAATACATATCCAATCATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTT 39529 |||| ||| |||| | | || || || ||||| | || |||||||||| |||||||| Sbjct 52426 AACAGATATATATGCC-TAATTACCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTT 52368 Query 39530 CTTTTTGTATATTATAATCGGCCAAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 | || || || || ||||||| ||| || || |||| || | ||| || || |||| Sbjct 52367 CCTTCTGAATGTTGTAATCGG--AAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAA 52310 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 || | ||||| ||||| | || | |||||||| || || ||| |||| | Sbjct 52309 GATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACGTT 52250 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | || |||| ||| || || || ||||| ||||| ||||| | || || || Sbjct 52249 ATCAATGGTATCTGACGATTCGACTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCAC 52190 Query 39708 GAAGATCTGCAT 39719 |||||||||||| Sbjct 52189 GAAGATCTGCAT 52178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347354862953273