Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2399 131 2e-25 seq3158 107 2e-18 seq599 82.4 8e-11 >seq2399 Length=446898 Score = 131 bits (144), Expect = 2e-25 Identities = 326/483 (67%), Gaps = 14/483 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || |||| |||||| ||| || || || |||||| Sbjct 271240 TTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCATGAAGTCGAATGGGTTG 271299 Query 132685 GCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| | |||| | || | || | || || || ||||| || |||||| Sbjct 271300 GTGGCGTTGTAAAATTTCTTGTTACCAA---GGGCCACAAGTAGTCTGTCAGCAACGAAC 271356 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 || ||||| || ||||| | || | |||| | ||| || || |||| || || || | Sbjct 271357 TCAATGTACTGGCACATGAGCTTAG-AATTCATTCCAAGTAGGGCGCAA-GGTAGGGCAT 271414 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | || | || || |||||| | || || ||||||| ||| || ||| || || Sbjct 271415 CCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCCTGGACGGCCGGCG 271474 Query 132860 CGCTCGGCCGTTGCACCAA-ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 || || || || || || ||| || | | || ||||||||| || | ||| Sbjct 271475 GGCCTGGGCGGTG-ACGAAGATGAGAAAAGAGGAGACAGGCAAAGTCGGTGTGGAGACCC 271533 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | || || ||||| || ||| || | ||| ||||| || || || || || Sbjct 271534 TCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGACCACGCTTCTTT 271593 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 | ||| || |||| ||||| ||| ||||| | |||||||||||||| || || Sbjct 271594 AACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACGGCCGCAAAGGCA 271653 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGC 133097 ||||| |||| |||| |||| ||||| | || | |||||| || | ||||| || || Sbjct 271654 ACCAGCCGCTGAGCGAAAGTGGATTCTTGGTCTTG-GATCCATCGAATGGCCCAGTCAGC 271712 Query 133098 CTT 133100 ||| Sbjct 271713 CTT 271715 Score = 129 bits (142), Expect = 6e-25 Identities = 194/275 (71%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || |||||||||||| || || | || ||||| | ||||||||| || || || Sbjct 271852 TATGTGTCGATGAGGAGAGAGTAGGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAC 271911 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || || || | ||| | || | ||| |||||||| || ||| Sbjct 271912 CCGTAGAAGCAACGGGCTTCTGGGATCTGGATCTCACCACTGAAGCGCTCGACAAGGTTT 271971 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 || || ||||| || ||| ||||||||| ||||||| ||||| |||||| | ||| Sbjct 271972 TCATTCACGATTCCATCGGAGGCGGCGAAGAAGGCCAAGACGTGTGAGATGAAGTAGCGT 272031 Query 133348 TCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || | ||||| | ||| | ||||||| | |||||||||| ||| | ||| || Sbjct 272032 TCATCATCGTTGAGTCGCTGATTCCAGTCGTGGAGATCCTTGGACAAGTCGATCTCTTCA 272091 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || || ||||| || |||||||| Sbjct 272092 GCAGTCCAGAAGGATGCTTCGGCCTTCTTGTACAT 272126 >seq3158 Length=82937 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || ||||| || ||||| | || || || || || Sbjct 51548 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 51607 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | ||| ||||| | ||||| ||||||||||| | ||||| Sbjct 51608 GACACAATTGACAACG-TAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCA 51666 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| |||||||| || || || | || || ||| |||||||| Sbjct 51667 GCAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAA 51726 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| | || || ||| | || || || ||| | || || Sbjct 51727 CATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGG 51774 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || ||||| || ||||| | || || || || || Sbjct 51950 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 52009 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | ||| ||||| | ||||| ||||||||||| | ||||| Sbjct 52010 GACACAATTGACAACG-TAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCA 52068 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| |||||||| || || || | || || ||| |||||||| Sbjct 52069 GCAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAA 52128 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| | || || ||| | || || || ||| | || || Sbjct 52129 CATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGG 52176 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| |||||||| || | || ||||| | | Sbjct 52178 ATGCAGATCTTCGTGAAGACCCTGACGGGAAAAACCATTACGTTAGAAGTCGAATCGTCA 52237 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| |||| ||| || | || ||||| || ||||| | || || Sbjct 52238 GATACCATTGATAACG-TTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCA 52296 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || || || || || || || | || || || ||| ||||| Sbjct 52297 ACAGCGACTCATCTTTGCTGGAAAGCAACTCGAAGATGGCCGTACGCTTTCCGATTACAA 52356 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| || ||||||||||| || | ||| | || || Sbjct 52357 CATTCAGAAGGAAAGCACTCTGCATTTGGTTTTGAGATTGCGTGGTGG 52404 >seq599 Length=174198 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| || || ||||| | ||| ||||||||||| || Sbjct 69641 GACAAGGAGGGCATCCCCCCAGACCAGCAACGTCTCATCTTCGCCGGCAAACAGCTCGAA 69582 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 |||| ||||||||| || || |||||||| ||||| Sbjct 69581 GACGGCCGCACCCTCTCGGATTATAACATCCAGAAGGA 69544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500151036231040