Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3259 489 2e-133 seq3224 201 1e-46 seq1990 154 2e-32 seq3095 100 4e-16 seq2322 98.7 1e-15 >seq3259 Length=396074 Score = 489 bits (542), Expect = 2e-133 Identities = 1056/1577 (67%), Gaps = 9/1577 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||||||| | || || || || || || | ||| ||| || ||||| || || Sbjct 234376 TCATCTTCAGCCTTGTATTTCTCGGCTTCGGCCAACATGCGTTCGATTTCTTCCTTGGAG 234317 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | || || || | |||| || | Sbjct 234316 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTTCCAGTACCCTTTTCGAGA 234257 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || || |||| ||||| | || | |||||| || Sbjct 234256 GCGGAAACGTTCATGATACCGTTGGCGTCAAGGTCGAAAGTGACTTCAATTTGGGGAACG 234197 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || |||| ||||| || || | || ||| |||| || || |||| ||| | Sbjct 234196 CCACGGGGCGCGGGGGGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTG 234137 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | |||||||||||||||||| | || ||| | || || || || Sbjct 234136 GTACGAGCACGTTCACCTTCATAGACCTGGATCAACACACCGGGCTGGTTGTCGGAGAAA 234077 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||| ||| ||||| | ||| || || || || | | || | || ||| Sbjct 234076 GTCGAGAAGGTTTCGGACTTCTTGGTTGGGATAGTGGTGTTGCGCTTGATGAGAGGAGTC 234017 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | |||||| |||||||| || | || ||||| | ||||| | || | | Sbjct 234016 ATGACACCACCAGCAGTTTCGATACCCAAGGAAAGAGGGGCAACGTCAAGAAGGAGGATC 233957 Query 6989 TCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || | ||| | | || || | |||||||| |||||||| | ||| || Sbjct 233956 TCGTTGGTAGACTTGGAGGAGGTATCGCCGGACAAGATGGCAGCTTGGACAGCCGCACCA 233897 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || ||||| || ||||| || | ||| || | || || ||||| || | || Sbjct 233896 TAGGCAACAGCCTCGTCAGGGTTGATGGATTTGTTGGGCTCCTTTCCGTTGAAGAAGTCG 233837 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | ||| | || || || || || || || || ||||| ||||| || ||||| | Sbjct 233836 GAAACCATCTTCTGGATCTTGGGAATACGGGTAGAACCACCAACCAAGACAATTTCGTGA 233777 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || || ||||| | || ||||| ||| || || ||||| Sbjct 233776 ACAGAGGACTTGTCAATCTTGGCATCGCGAAGGACACGTTCAACGGGCTCCATGGTGGAT 233717 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | |||| || ||||| || ||||| |||||||| ||||| || ||||||||| Sbjct 233716 CGGAAAAGGTCCTGGCAGAGTTCTTCGAAACGAGCACGGGTGATGGAAGTGTAGAAATCA 233657 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || ||| | | || || || ||||||| || || || | || || | || ||| Sbjct 233656 ATACCTTCGAAGAGAGAGTCGATCTCAATGGAAGTCTGGGCAGCAGAGGAAAGAGTGCGC 233597 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| || || || || | |||||| || ||||| || || ||| | ||| Sbjct 233596 TTGGCACGCTCGCAAGCAGTGCGGAGACGACGGAGAGCACGAGGATTGGAGGAGAGATCC 233537 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || || || || || | |||||| || || | || || || Sbjct 233536 TTCTTGTGCTTGCGCTTGAATTCGTTGACGAAGTGGTTAACAAGACGGTTGTCAAAGTCC 233477 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| || || || || || | |||||||| |||||||| ||||||| Sbjct 233476 TCACCACCCAAGTGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATACCCTCTTCAATA 233417 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | |||| ||||||||||| || || || ||||| || ||||| || || || ||| Sbjct 233416 GTCAACAGGGAAACATCAAAGGTGCCGCCGCCCAGATCGAAAATTAGGACATTACGCTCG 233357 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | || | ||||| || || |||||||| ||||| || || || || || ||||| ||| Sbjct 233356 CCCTCCGTCTTCTTGTCCAGGCCGTACGCAATAGCGGCAGCAGTAGGCTCGTTAATGATA 233297 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 |||||| || || || |||||| | || || || |||||||| || || ||||| Sbjct 233296 CGAAGAACATTAAGACCGGCAATAAGACCGGCGTCCTTGGTCGCTTGGCGCTGAGAATCA 233237 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || ||||| || ||||| || ||||| |||| |||| | |||||| || | || Sbjct 233236 TTGAAGTAAGCTGGGACAGTGACGACAGCGTTGTTGACAGTACCACCGAGGTAAGCCTCG 233177 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 || | ||| |||| ||||| |||||||| || || || || || | | ||||||||| Sbjct 233176 GCAGTTTCTCTCATCTTGGTGAGAACCATGGACGAGATTTCCTCTGGGGTGAACTGTTTC 233117 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 || || || ||||| || |||| || | || || | | || | |||| ||| Sbjct 233116 GTCTCGCCCTTAAATTCGACTTGCATAACAGGCTT---CCCTGCCTTGTCAATAATCTTG 233060 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 ||| ||| |||||| ||| | ||||||| | ||| | ||||| | || || ||| Sbjct 233059 AACGGGAAATGTTTCATGTCGGCCTGGACCTCTGCGTCGGCGAACTTGCGACCAATGAGA 233000 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 || || || || || || ||||| ||||||||||||| ||| ||||| || || || Sbjct 232999 CGTTTGGCGTCGAAGACAGTGTTGATGGGGTTCATGGCGACTTGATTCTTTGCGGCATCA 232940 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 ||||| ||||| || || || || || || ||| |||| || || ||||| || || Sbjct 232939 CCGATTAGACGCTCGGTA---TCTGTGAAGGCAACGAACGAGGGAGTAGTTCGGTTTCCC 232883 Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125 |||||||| || || || || | |||||| | | | | || ||||| || || || Sbjct 232882 TGGTCGTTGGCGATGATCTCAATGCGGTCATCACGGAATATACCCACGCAGGAGTAGGTG 232823 Query 8126 GTTCCTAAATCAATACC 8142 || || || |||||||| Sbjct 232822 GTGCCCAAGTCAATACC 232806 >seq3224 Length=193136 Score = 201 bits (222), Expect = 1e-46 Identities = 368/531 (69%), Gaps = 11/531 (2%) Strand=Plus/Minus Query 105472 TCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTT-GCCTGATCAGG 105530 || || ||| | |||||||| | |||||| || || | | ||||| |||| || ||| Sbjct 110253 TCATAGAGAGCCTCAAACTCATCACCGTAGACATCGGCCA-ACCCTGGCGCCTCATTAGG 110195 Query 105531 ACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCA 105590 ||| ||||||| ||| | ||| | ||||| ||||||||||||||||| ||| |||| Sbjct 110194 ACAGAACAATGTCCATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCA 110135 Query 105591 CATGGC--TGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATT 105648 | || ||||||| || || ||| | || || | || || ||| ||||| Sbjct 110134 AAGAGCAAGGAAAAGA--TCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGA 110077 Query 105649 TCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTA 105708 || ||||| |||| |||||||| |||||| ||||| | ||||| || | | ||| Sbjct 110076 TCCAGAAACTCGAAAATATCGGAGTGCCAAGGTTCAAGATAGATGGCGAAGGCACCTGGC 110017 Query 105709 CG---ACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGA 105765 || | || |||||| ||| |||| ||||| |||| | || || | ||| ||| Sbjct 110016 CGCTTATTGCCACCTTGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGA 109957 Query 105766 ATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCG 105825 | || |||| ||| | ||||| ||||| ||| | || | | ||||| | | Sbjct 109956 ACGATCCCATTGGAGGAGCCATTCGTTCCTGCAATGTAGGAACCAGTCGCACGGATACGA 109897 Query 105826 TGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTA 105885 ||||| | | |||||||| ||||| || || | ||||| ||| | ||| Sbjct 109896 TGAACATTAAGACCAATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTA 109837 Query 105886 TCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGT 105945 || |||||||||||||| ||||||||||| | |||| |||||||| || | ||| ||| Sbjct 109836 TCATAAATACCGTCGATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGT 109777 Query 105946 GGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995 || ||| || || || |||||||| ||||| || | |||||| |||| || Sbjct 109776 GG-CTGTGGCGTCCCCGCATTGAAAAGAGTGGGAGAAGCATGAGTGAAAAA 109727 >seq1990 Length=99681 Score = 154 bits (170), Expect = 2e-32 Identities = 365/548 (67%), Gaps = 5/548 (1%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||||||||| |||||||| || || | |||||| | || || | | |||| Sbjct 19372 AGGTCCTCAAAACGGGCACGGGTGATCTGGGTGTTGAAATCCTCTCCATCAAAAAGCGAA 19313 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| |||| || || || | || || | || |||||||| || || || || Sbjct 19312 TCAATCTCAACAGTGGTCTGGGTCGCATTGGAGAGGGTACGCTTTGCACGTTCGCAGGCA 19253 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 ||||| | || || ||||| | | | ||| || | ||| ||||| || || | Sbjct 19252 GTTCGGAGGCGGCGGAGGGCTCTGGCATCACCAGAGAGATCCTTCTTGGTCTTTCGCTGG 19193 Query 7424 AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 ||||||| ||| || ||| ||||| | | |||||| || | |||||| | || || Sbjct 19192 AACTCTTTCTTGAAATGATCG-AGGAGGTTGGTATCGAAGTCCTGACCACCAAGATGGGT 19134 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || ||||| || ||||| || | ||| || | || || | | |||||||| Sbjct 19133 GTCGCCAGCGGTGGCCTTGACAGTGAAAACACCACCCTGGATATTCAGGAGAGAAACATC 19074 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCTT 7599 || ||||| ||||||| || | ||||| || || | | |||| ||| Sbjct 19073 GAAAGTACCGCCACCCAAATCGTAGATGAGAACATTGCGCTCCTTGTCGGATTTTCCGGA 19014 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | | ||||| || ||||| || || || || || || || ||||||||| ||||| Sbjct 19013 ACCCAAGCCGTAGGCAATAGCAGCGGCAGTGGGCTCGTTGATGATACGAAGAACGTTCAA 18954 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 |||||||| | | ||||| || || || || || || ||||| || ||||| || Sbjct 18953 TCCAGCAATGGCACCGGCATCCTTGGTGGCCTGGCGCTGGTTGTCGTTGAAATAGGCTGG 18894 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || || || || | | ||| ||| | ||||| | | ||||||| |||||||| Sbjct 18893 CACGGTAACCACGGCCTTAGAGACCTTCATTCCGAGCTTGGTCTCCGCGACTTCTTTCAT 18834 Query 7780 TTTGGTAA 7787 | |||| Sbjct 18833 CTGAGTAA 18826 >seq3095 Length=411055 Score = 100 bits (110), Expect = 4e-16 Identities = 220/327 (67%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | ||| ||||| || || | || || ||||||| || Sbjct 143807 ATCGAAGTCCTCACCACCAAGGTGAGTATCACCATTAGTAGACTTCACCTCAAAGACGCC 143866 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | || | ||| || ||||||||||| || ||| | | || | Sbjct 143867 CTTTTGGATTTCGAGGATGGAGATATCGAAAGTACCACCACCAAGATCATAGAC-AG--C 143923 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || |||| | ||| || |||||||| || | ||||| || |||||||| Sbjct 143924 GACCA---CGCGATCTTGCTCCTTCTCAAGACCGTAGGCAAGGGCCGCAGCAGTTGGTTC 143980 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| | |||||| ||| || || ||||| | ||||| ||||| ||||| || Sbjct 143981 GTTAACGACACGAAGGACGTTGAGACCGGCAATCTGACCAGCATCCTTCGTGGCTTGACG 144040 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || ||||| ||||| || || || || ||||| ||| | | | ||| ||| Sbjct 144041 TTGAGAGTCGTTGAAGTAAGCAGGAACGGTGACGACGCCGTTCTTCGCGGGCTTGTTGAG 144100 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || | || ||| | ||||||||||| Sbjct 144101 GTAGGCCTCAGCGGTTTCTTTCATTTT 144127 >seq2322 Length=302684 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 |||||||| || || ||||| || || |||||||| || || ||||| || || | Sbjct 272182 TTACCAATAGCGTCGATTTCGTCGATGAAGATAATGCAAGGGGTATTTTTTCGCGCGGTT 272123 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAA---CGAT 11565 |||| | |||||| || | || ||| || || ||||||||||| ||||| ||| Sbjct 272122 GCAAAGAGATCACGAACGCGAGATGGGCCGACACCAACAAACATTTCCACGAATTCCGA- 272064 Query 11566 GACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGT 11625 ||| | |||||| | ||||||||| |||||||| || | || ||||| | | Sbjct 272063 -ACCGCTGACACTGTA-GAAAGGAACGCCTGATTCACCGGCCGTGGCTTTTGCTAGCAAT 272006 Query 11626 GTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 || ||||| |||||||| || | |||| ||||| | || ||||| ||||| Sbjct 272005 GTCTTACCGGTACCTGGAGGTCCCGACAATATCGCACCACGAGGAATTTTGGCACC 271950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635105163784040