Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2399 132 6e-26 seq3224 129 7e-25 seq944 96.9 4e-15 seq2322 84.2 3e-11 seq495 82.4 9e-11 >seq2399 Length=446898 Score = 132 bits (146), Expect = 6e-26 Identities = 347/522 (66%), Gaps = 18/522 (3%) Strand=Plus/Minus Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTC 102166 ||||||||| || |||| ||||| || || ||||| || | | | ||| ||| | Sbjct 271737 AACAGTTCCTTGCATTCGTAAGAAGGCTGACTGGGCCAT----TCGATGGATCCAAGACC 271682 Query 102167 GCGT-TCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 102222 | ||| || ||| |||| || | || |||||| || |||||||| |||||| Sbjct 271681 AAGAATCCACTTTCGCTCAGCGGCTGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCA 271622 Query 102223 CTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 ||| || ||| | |||| ||| | |||||||| ||||| ||||| || || || Sbjct 271621 GTGGCTCGTTCGCTTCCATTTTCTGGTTAAAGAAGCGTGGTCTTATGCCTGGCCTTACCT 271562 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACT 102340 |||| || || || ||||||||||||||||| |||||| || ||||| | || Sbjct 271561 TCTCGAATGAACTGATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCT 271502 Query 102341 TTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGC 102400 |||| || | ||| ||| | | | | || | || | | || || Sbjct 271501 TTTCTCAT--CTTCGTCACCGCCCAGGCCCGCCGGCCGTCCAGGCCATCATCACCGAGGC 271444 Query 102401 CGTTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAA 102460 |||||||| ||||| | |||| | ||||||||| || ||||| || | || ||||| Sbjct 271443 AGTTGAGATCGAGAAAGAATTCTTGACGGATGCCCTACCTTGCGCCCTACTTGGAATGAA 271384 Query 102461 TTCTGAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGA-TTGTTGAAGCAGATCG 102519 |||| | |||| | | || ||||||| || |||| ||| | ||| || | Sbjct 271383 TTCTAAGCTCATGTGCCAGTACATTGAGTTCGTTGCTGACAGACTACTTGTGGC---CCT 271327 Query 102520 GGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCT 102577 ||| | || ||| ||| ||| || ||||| ||||||||||| |||||| | Sbjct 271326 TGGTAACAAGAAATTTTACAACGCCACCAACCCATTCGACTTCATGGACAACATTTCGTT 271267 Query 102578 CGACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 | ||| ||||| ||||||||||| ||| | ||||| || || Sbjct 271266 GGCCGGTAAGACGAACTTCTTCGAGAAGCGTGTTGGTGATTA 271225 >seq3224 Length=193136 Score = 129 bits (142), Expect = 7e-25 Identities = 399/612 (65%), Gaps = 13/612 (2%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || | || || || || || ||||| || |||||| Sbjct 109644 ACATGATCATGCGTGTTGCCGTTGGCATTCACGGCGAGGATATCGAGAAAACGATGGAGA 109703 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | || | |||||||| | |||| || || | || || || ||||| || | Sbjct 109704 CCTATAATTTGATGTCCCAGAAATTTTTCACTCATGCTTCTCCCACTCTTTTCAATGCGG 109763 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | || ||| || || ||| | |||||||| |||| | ||||| ||| ||| Sbjct 109764 GGACGCCACAGCCACAGATGGCTTCCTGTTTCCTCATTGATATGAAGGAAGATAGCATCG 109823 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | || ||||| | || |||| ||||||| || || || ||||||||||| | Sbjct 109824 ACGGTATTTATGATACCCTCAAAACCTGTGCCCTGATTTCCAAAACAGCTGGTGGTATTG 109883 Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACAAATGGTCA 111916 | | | | ||| | || | | | || || || | ||| ||| || ||||| Sbjct 109884 GTCTTAATGTTCATCGTATCCGTG-CGACTGGT-TCCTACATTGCAGGAACGAATGGCTC 109941 Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976 || |||| || |||| |||||||| || |||||| ||| || || || || | || Sbjct 109942 CTCCAATGGGATCGTTCCTATGCTTCGTGTCTTTAACAACACCGCTCGATACGTCGATCA 110001 Query 111977 AGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGA 112030 || ||| ||| || ||| || |||| |||||||||| || |||||| | || Sbjct 110002 AGGTGGCAATAAGCG--GCCAGGTGCCT-TCGCCATCTATCTTGAACCTTGGCACTCCGA 110058 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGA 112090 ||| | ||||| || || | ||| ||||| || | ||||| | | | ||| || Sbjct 110059 TATTTTCGAGTTTCTGGATCTTCGTAAGAACCACGGAAAGGAGGAAGTGAGAGCCCGTGA 110118 Query 112091 TCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAA 112150 ||| ||| ||||| |||| ||| ||| | |||||||| | |||||| ||| || | Sbjct 110119 TCTTTTCCTTGCTCTTTGGACTCCCGATTTGTTCATGAAACGGGTTGAGCAGAACGGTGA 110178 Query 112151 TTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTT 112210 ||| | | || ||||| | |||| || || | |||||| | ||||| ||||| Sbjct 110179 ATGGACATTGTTCTGTCCTAATGAGGCGCCAGGGTTGGCCGATGTCTACGGTGATGAGTT 110238 Query 112211 TGAAGCCCTCTA 112222 ||| || ||||| Sbjct 110239 TGAGGCTCTCTA 110250 >seq944 Length=8805 Score = 96.9 bits (106), Expect = 4e-15 Identities = 278/416 (67%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 || || ||| || ||||| || || || || |||||| || || | || |||||| Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 15938 CGTTGCGGCGATGACAACAATACC-TGTTTCGTTATCAAAACCATCCATCTCTGTCAAAA 15996 || || |||| || | || || | |||| || || || ||||| || || | Sbjct 7559 GGTCGCCGCGACGATGATGATCCCCTCGTTCGCC-TCGAAGCCGTCCATTTCGACCAGCA 7617 Query 15997 GCTGGTTAATAGTTTGTTCCCGTTCATCATTCGC-TGGCATACCACCAGCACTGCGTTGC 16055 ||||||| | || || || || || || || | | || | | || |||| ||| ||| Sbjct 7618 GCTGGTTCAGCGTCTGCTCGCGCTCGTCGTTGCCGTTGCCCAGCCCC-GCACCGCGGTGC 7676 Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTT--GATTTTCGCGAGCGA 16113 || ||||| || ||||| || |||||||||||||| || || || | | || Sbjct 7677 CGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTT-CTTG-GCCT 7734 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 ||| || | || || || || |||||||||| || || ||||| ||||| |||| | Sbjct 7735 GTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGTCCG 7794 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 ||||| || | || || || || | ||||||||||| || |||||||| || Sbjct 7795 AACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGCAGC 7853 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| || ||||| ||| || | || || || || || |||||| |||| Sbjct 7854 GTCTTGCCGGTACCGGGCGATCCGACCAGCAGCGCGCCCTTCGGGATCTTGCCGCC 7909 >seq2322 Length=302684 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 || || || || || ||||||| ||||| || ||||| || ||| | |||||||| Sbjct 272173 GCGTCGATTTCGTCGATGAAGATAATGCAAGGGGTATTTTTTCGCGCGGTTGCAAAGAGA 272114 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 16182 || || || || | ||| |||||||||||||| ||||| || | | | || | || Sbjct 272113 TCACGAACGCGAGATGGGCCGACACCAACAAACATTTCCACGAATTCCGAACCGCTG-AC 272055 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | || | ||| || || |||||||| || ||||| || || | |||||||| | Sbjct 272054 ACTGTA-GAAAGGAACGCCTGATTCACCGGCCGTGGCTTTTGCTAGCAATGTCTTACCGG 271996 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289 ||||||| |||| | | ||||| || ||||| ||||| ||| Sbjct 271995 TACCTGGAGGTCCCGACAATATCGCACCACGAGGAATTTTGGCACCA 271949 >seq495 Length=77767 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 ||||| |||||||| |||||||| ||| ||| ||||||||||||||| ||||||| Sbjct 8396 AGACCTTTGATGTGACTACCGTCGTGATCTTGATCAGTCATGATCATGAGATGACCATAG 8455 Query 176792 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 176851 ||||| | || ||| ||||| || || || || | || || |||| | Sbjct 8456 CGAAGGCCACGTGTGTCCGTATATTCCTTCTTGTGCTGTAGGCCGAGGAAATTTTTGATA 8515 Query 176852 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910 | ||||| ||||||||| | | ||| || || |||||||| || || Sbjct 8516 T-TTTGAATTTCTTGGTTTTTGGAAATCTGATCAACGGATGCATCACGCACGTTGAGTAG 8574 Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAG 176957 ||| || || || |||||||| || || ||||| ||||||| |||| Sbjct 8575 CTTTCCTCGCAGGGGGAAGACGCCAAAGAGATCGGGACCAACAACAG 8621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620715389946320