Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3224 172 6e-38 seq2399 87.8 2e-12 seq1437 84.2 3e-11 seq1016 84.2 3e-11 >seq3224 Length=193136 Score = 172 bits (190), Expect = 6e-38 Identities = 461/699 (66%), Gaps = 13/699 (2%) Strand=Plus/Minus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT-CGCCTTGTCGGGACAGAAGAGG 110589 ||||||| || | ||||| ||||| | | ||||| ||||| | |||||||| | Sbjct 110243 CCTCAAACTCATCACCGTAGACATCGGCCA-ACCCTGGCGCCTCATTAGGACAGAACAAT 110185 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||| | || || |||||||| |||||||||| || ||| |||| | || | Sbjct 110184 GTCCATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGAGCAAGG 110125 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 ||||| |||||| | | || || | || ||||| || || |||| ||| || Sbjct 110124 AAAAGATCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGAAACTCG 110065 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGA 110763 | ||||| |||||||| ||||| ||||||| |||| || || |||| | | Sbjct 110064 AAAATATCGGAGTGCCAAGGTTCAAGATAGATGGCGAAGGCACCTGGCCGCTTATTGCCA 110005 Query 110764 CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCA 110823 || || | || || || || ||| || ||||| | |||||||||| || ||| Sbjct 110004 CCT---TGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGAACGATCCCA 109948 Query 110824 TCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGC 110883 | ||| ||||| || || ||| ||| | | ||||| || || | || Sbjct 109947 TTGGAGGAGCCATTCGTTCCTGCAATGTAGGAACCAGTCGCACGGATACGATGAACATTA 109888 Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATA 110943 | |||||||||||| || || ||| | ||||| | |||| ||| |||||||| Sbjct 109887 AGACCAATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCATAAATA 109828 Query 110944 CCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGC 111003 || || || |||| |||| | |||| || || || |||| |||||| || | ||| Sbjct 109827 CCGTCGATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGTGGCTGTGGC 109768 Query 111004 GTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTG 111063 || ||||||||||| || || || | |||||| |||| | ||||||||| || Sbjct 109767 GTCCCCGCATTGAAAAGAGTGGGAGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTA 109708 Query 111064 TATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAAC 111123 || || || | | | ||| | |||||||| |||| |||||| ||||||| | Sbjct 109707 TAGGTCTCCATCGTTTTCTCGATATCCTCGCCGTGAATGCCAACGGCAACACGCATGATC 109648 Query 111124 ATATATTGAGGCGTTTCGATTAGCTTT-CCATCAACACGCTGAAGGTAACTCTTCTCTAG 111182 || | ||| ||| || | | |||| |||| | ||| | || || | |||| || Sbjct 109647 ATGTGTTGGGGCCGCTC-AGCAACTTTGCCATTGATTCGCAGCAGATATGACCTCTCCAG 109589 Query 111183 GGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||||| || || ||| | | |||||||||||| Sbjct 109588 TGTCTTGAACCCGAAATATTGGTAGTTGAAATCACGATC 109550 Score = 107 bits (118), Expect = 2e-18 Identities = 297/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 ||| ||| |||||||| ||||| ||||| || ||||| |||||| || | ||| Sbjct 111424 GCCATCGTACGAAGATAGTACATGCCCGTCTTCAGACCCAGTTTCCATCCGGCAAAGTGC 111365 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || | || |||| | || || || | | | ||| | |||||||||||| Sbjct 111364 ATGCTTGTGATTTTGCCCATAGTAGGCTCCTTGAGATGAATGTTGAGCGACTGAGACTGG 111305 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAG 109578 || |||||| || || ||||| ||||| | | |||| | ||||| ||||||||| Sbjct 111304 TCAATGAATGCGCCTCGGTCAGCAGCCATTTGAACGATAGTCCTTTGGGAAATTTCCCAT 111245 Query 109579 ACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCA 109638 || |||||||| | | || || || |||| |||| |||||||||| || || Sbjct 111244 ACTGTCTTGTAAAGAGCTTTAATGTCTGCGGGGATGTTTGGAATGTTTTGAACTGAACC- 111186 Query 109639 CCAGCCTTCA-CCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 ||| ||| | |||| | | |||||| | | |||||||| |||| | || Sbjct 111185 ---GCCGTCAGCTATGATACGGTTCTTCATGTTGTCGGACCAGAGGCCGAGGTCGACAAG 111129 Query 109695 ATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754 ||| | | ||| | |||||| | |||||||| ||||| || || || Sbjct 111128 ATCCTTCAGAAGCCACGGGTTGACAATTTGGAATTCACCCGCAAGGACTCGCCGAGAATA 111069 Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814 |||||| | |||||| ||||| ||||| || ||| || || || || ||| ||| Sbjct 111068 GATGTTTGACGTGTATGGTTCAAAACATTCGTTGAATCCGAGAATCTGACTTGTGCTAGC 111009 Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCG 109847 || |||||||| || | || | ||||| || Sbjct 111008 AGTCGGCATGGGGGCAACAAGCAAGCTGTTGCG 110976 >seq2399 Length=446898 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 3/132 (2%) Strand=Plus/Plus Query 119880 ttttCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACTTTATGAATTTC 119939 |||||| || ||||||||||| | |||||||| || |||| || ||||| | Sbjct 271969 TTTTCATTCACGATTCCATCGGAGGCGGCGAAGAAGGCCAAGACGTGTGAGATGAAGTAG 272028 Query 119940 TGTTCATTATCGTTGAGT-GTT--TTCCAGTCGTCCATATCTTTAGACAAGTCCACCTCT 119996 |||||| |||||||||| | | |||||||||| | ||| || |||||||| | |||| Sbjct 272029 CGTTCATCATCGTTGAGTCGCTGATTCCAGTCGTGGAGATCCTTGGACAAGTCGATCTCT 272088 Query 119997 TCAGCTGTCCAG 120008 ||||| |||||| Sbjct 272089 TCAGCAGTCCAG 272100 >seq1437 Length=11314 Score = 84.2 bits (92), Expect = 3e-11 Identities = 242/368 (66%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || || ||||| || || || | || || || || ||||| || ||| Sbjct 9508 CGGTCGAAGCGGCCGGGGCGCAGCAGGGCGGCGTCCAGGATGTCCGGGCGGTTGGTGGCG 9449 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || | | ||| | | ||||| |||||||| || || | ||||||| Sbjct 9448 GCCACCACGATCACGCCCAGGTTGGTCTCGAAGCCGTCCATCTCGACCAGCATCTGGTTG 9389 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAACGCTTCTTACCGA 11680 | ||||| || ||||| |||||| | | ||| || || ||||| |||| Sbjct 9388 AGGGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCACGCTGGCGGCCGA 9331 Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAA 11740 | ||||| |||||||||||||| | ||| || || ||| || | ||||| | Sbjct 9330 CCGCGTCGATCTCATCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCGTTCTCGAACA 9271 Query 11741 GTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-A 11799 || || || || ||| || || || ||||||||||| ||||||| | | | || | Sbjct 9270 TGTCGCGCACGCGGGCCGCGCCGACGCCGACGAACATCTCCACGAAGTCGGAGCCCGAGA 9211 Query 11800 CACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCC 11859 ||||| ||| || || || | ||| || |||||| | || || || ||||| || Sbjct 9210 TGCTGAA-GAACGGCACCTTGGCCTCGCCGGCGATGCCCTTGGCCAGCAGCGTCTTGCCG 9152 Query 11860 GTACCAGG 11867 || || || Sbjct 9151 GTCCCCGG 9144 >seq1016 Length=414906 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/89 (82%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||| ||||||||||||||| |||||||| |||||||||| ||| |||||||| |||| Sbjct 220192 ATAACTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAAGTCGAGGGTTCGACCCCCTC 220133 Query 136776 TGGGAACAGCTTTTAGATAT-ATTTTTTG 136803 ||||| || ||| |||| |||||||| Sbjct 220132 TGGGACCA---TTTGAATATCATTTTTTG 220107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588950372181800