Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2399 138 1e-27 seq3224 111 2e-19 seq2322 89.7 6e-13 seq944 87.8 2e-12 >seq2399 Length=446898 Score = 138 bits (152), Expect = 1e-27 Identities = 345/517 (67%), Gaps = 8/517 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||| ||||| || | | |||||| ||||| Sbjct 271225 TAATCACCAACACGCTTCTCGAAGAAGTTCGTCTTACCGGCCAACGAAATGTTGTCCATG 271284 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||| ||||| || | ||||| ||| | || ||| || || || | Sbjct 271285 AAGTCGAATGGGTTGGTGGCGTTGTAAAATTTCTTGTTACC--AAGGGCCACAAGTAGTC 271342 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 || | || |||||||||||| | |||| || ||| ||||| || | || | Sbjct 271343 TGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTAGAATTCATTCCAAGTAGGGCGC 271402 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || || ||| | ||| ||||||| |||||||| ||||| | | |||||| | Sbjct 271403 AAGGTAGGGCATCCGTCAAGAATTCTTTCTCGATCTCAACTGCCTCGGTGATGATGGCCT 271462 Query 117224 GGATAGTTT-CGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCC 117282 ||| | ||| |||| | | ||| | | ||||| |||||| || Sbjct 271463 GGACGGCCGGCGGGCCTGGG-CGGTGACGAAGATGAGAAAAGAGGAGACAGGCAAAGTCG 271521 Query 117283 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGA 117342 |||||||||||| || || || || |||||||| |||||| ||||| ||||| ||| Sbjct 271522 GTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAGGCCAGGCATAAGA 271581 Query 117343 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402 || |||||||| ||||| |||| | ||| || || |||||| |||||||| || Sbjct 271582 CCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAAAATACCCTCGACG 271641 Query 117403 CACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCAT 117461 |||||| |||| || |||| ||||| | | || ||| || | | |||| || Sbjct 271642 GCCGCAAAGGCAACCAGCCGCTGAGCGAAAGTG-GATTCTTGGTCTTGGATCCATCGAAT 271700 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTT 117498 ||||| | |||||||| ||| || || || ||| Sbjct 271701 GGCCCAGTCAGCCTTCTTACGAATGCAAGGAACTGTT 271737 >seq3224 Length=193136 Score = 111 bits (122), Expect = 2e-19 Identities = 695/1091 (64%), Gaps = 50/1091 (5%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGC-GCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 |||||||||| ||| || | |||| | | || ||||||||||| || ||||| || Sbjct 111447 TGAACTGAAT-GGGTGCAGAGGCTGCCATCGTACGAAGATAGTACATGCCCGTCTTCAGA 111389 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATG 105676 || ||||||| || | ||||| | || ||| ||| || || ||| || Sbjct 111388 CCCAGTTTCCATCCGGCAAAGTGCATGCTTGTGATTTTGCCCATAGTAGGC---TCCTTG 111332 Query 105677 AAAAGA---TTCATACTTTGACTCTGGTCAATGAA-GCGACCACGTTGTGCCGCCATATC 105732 | | || || | ||| |||||||||||| ||| || || | || ||||| | Sbjct 111331 AGATGAATGTTGAGCGACTGAGACTGGTCAATGAATGCG-CCTCGGTCAGCAGCCATTTG 111273 Query 105733 AATGACA-TCCTTCATCTTG---ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCAT 105788 || || | ||||| | | |||||||| ||||| ||| ||| || || || Sbjct 111272 AACGATAGTCCTT----TGGGAAATTTCCCATACTGTCTTGTAAAGAGCTTTAATGTCTG 111217 Query 105789 CTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC-ATGAGA---TCCTTC 105844 | ||||| | || || ||||||| |||||| ||| | | | |||| | | |||| Sbjct 111216 CGGGGATGTTTGGAATGTTTTGAACTGAACC----GCCGTCAGCTATGATACGGTTCTTC 111161 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 || | | |||||| || || | | ||||| || | || | ||||||||| Sbjct 111160 ATGTTGTCGGACCAGAGGCCGAGGTCGACAAGATCCTTCAGAAGCCACGGGTTGACAATT 111101 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 || || ||||| ||| || | ||||||||| | |||||| |||||||| ||| Sbjct 111100 TGGAATTCACCCGCAAGGACTCGCCGAGAATAGATGTTTGACGTGTATGGTTCAAAACAT 111041 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAA--AAGAC 106022 || || || | || || ||| || || ||||| || || | ||| ||| | Sbjct 111040 TCGTTGAATCCGAGAATCTGACTTGTGCTAGCAGTCGGCATGGGGGCAA-CAAGCAAG-C 110983 Query 106023 TGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTG 106078 |||| || | || | ||| | | | || ||||| |||||| || | | | Sbjct 110982 TGTTGCGCACGCCGTGCTTTGCAATCTCCTTT--TTGAGCGAATCCCAATCCCAAAGGTC 110925 Query 106079 AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCC 106138 | || ||| |||| |||| |||||||| | || | || || || || ||| || || Sbjct 110924 A-CTAGGTGTCACTTTCC-ACATATCATACTGCAAAACACCCTGCGAAACGGGGGAGCCT 110867 Query 106139 TCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCG 106198 || | ||||| || | ||| | | | | || | || || ||| || | || Sbjct 110866 TCGTACGTCTCGTAAGGACCCTCGACCTTGGCTATGTCGCAAGACGCGGTCAACGCGCCG 110807 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 ||||| || ||||| || || | ||||| || |||||| || || ||||| | Sbjct 110806 TGATAAATTGTTTCGAAAATTTGTATATTCAACTGCTTGGCCTCGGGCGAGTCAAACGGC 110747 Query 106259 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318 |||| | || || |||| || || ||||| ||||| | |||| || | || Sbjct 110746 AAGCGCAAAGCAAGGAAAGCATCGGCAAGCCCTTGCACACCGACCGCAATTGGACGATGG 110687 Query 106319 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 106375 || | |||| |||| || || |||| || |||||| || | ||||| | | Sbjct 110686 CGGAAATTA--CTTTTCCG-AGCCTCAGGAACAGGATAATGGTTGCCATCAATTATCTTG 110630 Query 106376 TTTAGATTTTTGGTAACAAT--CTTT-GTGATTTCATGAAGTTTTTCATAATCAAAAGTG 106432 || | ||| | ||||| ||| || | |||||| | ||| || | ||| | | Sbjct 110629 TTCAAATT---GCGAACAAGAACTTGCGTAACTTCATGCAATTTACCAAAGTCATACTCG 110573 Query 106433 CGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 106492 | | | || ||||| | || | ||| | ||||| | ||||||||||| Sbjct 110572 CCACGAACAGGATCAACATATGTGGGCAAGGCAAGGGATGCTAGGTTGCAAACAGCAACT 110513 Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552 ||||| | || ||||| | || || ||||||||||| || || |||||| || Sbjct 110512 TCATCTGGTGCGGTATACTCGATGATCTCCGTACACAAGTTAGAGCTTCGAATCGTTCCG 110453 Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612 | ||| || ||||| |||||| ||||| || |||||||| |||||| | || | || Sbjct 110452 AGATTTTTCTGGTTGCTCTTTCGATTGCATGCGTCCTTGTAAAGCATGAAAGGATTTCCG 110393 Query 106613 GTCTCCGTCTG 106623 ||||| ||||| Sbjct 110392 GTCTCGGTCTG 110382 >seq2322 Length=302684 Score = 89.7 bits (98), Expect = 6e-13 Identities = 272/417 (65%), Gaps = 25/417 (6%) Strand=Plus/Minus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 ||| || || || ||||| | || || | ||||| | ||| | ||| || | || Sbjct 272354 ATCGAATCGGCCAGGACGCATCAGGGCTTTGTCAAGCACATCCGGCCTATTGGTACCAGC 272295 Query 9254 GATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGGTT 9310 || |||||||| || ||| ||| ||| ||||||||||| || | | ||| || Sbjct 272294 GAGGACAACAA---CTTGCTCAGACGTATTAAAGCCATCCATCTCCGTTAGGATTTGATT 272238 Query 9311 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC-------- 9362 | ||| |||||||||||| || | ||||| | | ||| | Sbjct 272237 CAAAGTACTTTCCCGTTCATCGTTACCG------CCACCGAAATTTTGTTTCGCTCTCGA 272184 Query 9363 -TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 || || | || || || || || ||||||| ||| || || ||||| || ||| | Sbjct 272183 TTTACCAATAGCGTCGATTTCGTCGATGAAGATAATGCAAGGGGTATTTTTTCGCGCGGT 272124 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9480 | |||||||||| ||||| | | ||| |||||||||||||| ||||| || | | Sbjct 272123 TGCAAAGAGATCACGAACGCGAGATGGGCCGACACCAACAAACATTTCCACGAATTCCGA 272064 Query 9481 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | || | ||| || | ||| || || |||||||| || ||||| || || | Sbjct 272063 ACCGCTG-ACACTGTA-GAAAGGAACGCCTGATTCACCGGCCGTGGCTTTTGCTAGCAAT 272006 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596 |||||||| |||||||| |||| | | ||||| || ||||| ||||| ||| Sbjct 272005 GTCTTACCGGTACCTGGAGGTCCCGACAATATCGCACCACGAGGAATTTTGGCACCA 271949 >seq944 Length=8805 Score = 87.8 bits (96), Expect = 2e-12 Identities = 275/416 (66%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 9185 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9244 || || ||| || ||||| || || || || |||||| || || | || |||||| Sbjct 7499 GACCTGACGGTCGAAGCGGCCCGGCCGCAGCAGCGCGGGGTCGAGCACGTCGGGGCGATT 7558 Query 9245 CGTCGCGGCGATGACAACAATACC-TGTTTCATTATCAAAACCATCCATCTCTGTCAAAA 9303 ||||| |||| || | || || | ||| || || || ||||| || || | Sbjct 7559 GGTCGCCGCGACGATGATGATCCCCTCGTTCGCC-TCGAAGCCGTCCATTTCGACCAGCA 7617 Query 9304 GTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC-TGGCATACCACCAGCACTGCGTTGC 9362 | ||||| | || || || || || || || | | || | | || |||| ||| ||| Sbjct 7618 GCTGGTTCAGCGTCTGCTCGCGCTCGTCGTTGCCGTTGCCCAGCCCC-GCACCGCGGTGC 7676 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTT--GATTTTCGCGGGCGA 9420 || ||||| || ||||| || |||||||| || || || || || ||| Sbjct 7677 CGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCCGACTTCTT--GGCCT 7734 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 ||| || | ||||| || | |||||||||| || || ||||| ||||| |||| | Sbjct 7735 GTTCGAACATGTCGCGCACGCGGCTGGCGCCCACGCCGACGAACATTTCCACGAAGTCCG 7794 Query 9481 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 ||||| || | || || || || | ||||||||||| || |||||||| || Sbjct 7795 AACCGGAA-ATGGTGAAAAACGGCACGCCCGCCTCACCCGCAATCGCGCGGGCGAGCAGC 7853 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || ||||| ||| || | || || || ||| || |||||| |||| Sbjct 7854 GTCTTGCCGGTACCGGGCGATCCGACCAGCAGCGCGCCCTTCGGGATCTTGCCGCC 7909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589955128460440