Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3190 102 9e-17 >seq3190 Length=111093 Score = 102 bits (112), Expect = 9e-17 Identities = 276/417 (66%), Gaps = 9/417 (2%) Strand=Plus/Plus Query 154707 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTC 154766 ||||| || | ||| |||| || | || || ||||| || || || |||||||||| Sbjct 94243 AAAAGGAACATCTGTCTGATCCCTGTTTCTGCTCATGGTACCAACCCGGCTAGTGCTGCA 94302 Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGAT---GGTAACATAGACATC 154823 |||||||||||||||||||| || ||||| ||| | | || ||| | || | Sbjct 94303 ATGGCAGGGATGAAAGTTGTCCCCGTAAAGTGCGATACCGCTACCGGAAACCTCGATGTT 94362 Query 154824 AAAGATCTA-GAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTAC 154882 || || ||| | || | | | | | | || ||| || || |||||||| Sbjct 94363 GCGGACCTCCGAGCTAAGTGCGAGAA-GCACAAAGAGGAGCTGGCAGCAATCATGATTAC 94421 Query 154883 ATACCCATCTACACAT--GGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTT 154940 |||||| | ||| | ||||| |||||| | | ||| | | | | || | || || Sbjct 94422 ATACCC--CAGCACTTTCGGTGTTTTTGAACCCAGCATCAAAGAAGTTTGCAGCATTGTC 94479 Query 154941 CATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTA 155000 || || |||| |||||||| ||| | || || || || | ||||| || | || || Sbjct 94480 CACGAACATGGCGGTCAGGTGTATATGGACGGCGCTAACATGAATGCTCAAATTGGGCTT 94539 Query 155001 GCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGT 155060 || ||||| ||| || || || || || || || | || ||||| || || Sbjct 94540 TGCTCTCCTGGTGAGATTGGCGCTGACGTCTGCCACCTTAATCTTCACAAAACCTTTTGC 94599 Query 155061 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTC 155117 ||||| || ||||| || || ||||| || || || || ||||| || || |||||| Sbjct 94600 ATTCCTCACGGAGGCGGTGGACCTGGAGTTGGGCCCATTGGTGTTGCCAAGCATCTC 94656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579187597003040