Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3158 165 2e-35 seq599 104 5e-17 >seq3158 Length=82937 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||||||||| | || |||||| || || ||||| |||||||||| ||| || | || Sbjct 52393 TCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCC 52334 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||||||| ||||| || || ||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 52333 ATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTT 52274 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||| ||| ||| ||||| |||||||| || || ||| ||||| | |||| Sbjct 52273 ATCTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAAT 52214 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| |||| || || ||||| | ||||| Sbjct 52213 GGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| || ||||| || || || ||||| | |||||| | || || || Sbjct 51528 ACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTCCTCA 51469 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | ||||| ||||||||||||||||| || || || ||| Sbjct 51468 AGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGA 51409 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || || || ||||| || ||| || || || ||||| | |||||| Sbjct 51408 ATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAACCTCTAGGGTGATGGTCTTT 51349 Query 195112 CCTGTCAAAGTTTTTACGA 195130 ||||||| || || |||| Sbjct 51348 CCTGTCAGGGTCTTGACGA 51330 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| ||||||||||| ||||| || | || || | |||||||| Sbjct 51756 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 51697 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || |||||||| | || || |||||||| ||||| || || ||||||||| Sbjct 51696 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 51637 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| ||||| ||||| || ||| ||||| | || | |||||| Sbjct 51636 ATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTG 51577 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| ||||| | ||||| Sbjct 51576 CCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| ||||||||||| ||||| || | || || | |||||||| Sbjct 52158 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 52099 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || |||||||| | || || |||||||| ||||| || || ||||||||| Sbjct 52098 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 52039 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| ||||| ||||| || ||| ||||| | || | |||||| Sbjct 52038 ATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTG 51979 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| ||||| | ||||| Sbjct 51978 CCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || ||||| ||||||||||| || || |||| || || | || || || Sbjct 51225 AACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTC 51166 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| | ||||| ||||||||||||||||| || || || || Sbjct 51165 GAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTG 51106 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || || || || || | ||||| || || || | ||||| Sbjct 51105 GATCTTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGGTCTT 51046 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||| || || ||||| | ||||| Sbjct 51045 TCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| || ||||| || || || ||||| | |||||| | || || || Sbjct 51930 ACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTCCTCA 51871 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTG 195028 |||||||| || |||||||| | ||||| ||||||| Sbjct 51870 AGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCTG 51834 >seq599 Length=174198 Score = 104 bits (114), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || || ||||| | || || | || |||||| Sbjct 69526 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGAGAGGGTGCGGCCGTCTTCG 69585 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| || || |||||||| || ||||| |||||||| || ||||| || |||||| Sbjct 69586 AGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 69642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109432116773927