Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3158 120 2e-22 seq599 84.2 1e-11 >seq3158 Length=82937 Score = 120 bits (132), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 ||| || || | ||| ||||||||||| || | |||||||| ||||||||||| || || Sbjct 52408 ATTACCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATC 52349 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||||| | || |||| || || || ||||| ||||| || ||||| || || ||| | Sbjct 52348 GGAAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGG 52289 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCT 34929 || | || || || || |||||| ||| || ||| | || | || | | Sbjct 52288 TGGAATACCTTCTTTATCTTGAATCTT-TGTCTTAACGTTATCAATGGTATCTGACGATT 52230 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || | || |||||||||||||| || |||||||| |||||||||||| Sbjct 52229 CGACTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCATA 52177 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| |||||| |||||||||||||| || || | || | || || Sbjct 51225 AACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTC 51166 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || ||||| || | |||||||||||| | || | |||||||| || Sbjct 51165 GAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTG 51106 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| || || || | ||||| || | | ||| || |||| || |||| Sbjct 51105 GATCTTGGTCTTAAC--AT--TGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGG 51050 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || | ||||| || || |||||||| Sbjct 51049 TCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/184 (72%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| |||||||| |||||||| | || | || || ||||| || || || || Sbjct 51511 TTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 51452 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | |||||||||||| | || | |||||||| || |||||| ||| || | Sbjct 51451 GATCAAACGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGAATCTTGGTTTTCAC--A 51394 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| ||| | |||||| || | ||| ||||| ||||| || || |||| Sbjct 51393 T--TATCGATGGTATCAGAAGACTCAACCTCTAGGGTGATGGTCTTTCCTGTCAGGGTCT 51336 Query 34966 TCAC 34969 | || Sbjct 51335 TGAC 51332 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| |||||| |||||||| ||||| || || | || |||| || | Sbjct 51755 CAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAA 51696 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | ||||| ||||| || || | || ||||||||| | || | ||||||||||| || Sbjct 51695 GTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAA 51636 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||| ||| ||| | || | || || ||||| || | || || || || | Sbjct 51635 TTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGC 51576 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || ||||||||| Sbjct 51575 CGGTTAAGGTTTTCACGAAAATCTGCATA 51547 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| |||||| |||||||| ||||| || || | || |||| || | Sbjct 52157 CAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAA 52098 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | ||||| ||||| || || | || ||||||||| | || | ||||||||||| || Sbjct 52097 GTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAA 52038 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||| ||| ||| | || | || || ||||| || | || || || || | Sbjct 52037 TTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGC 51978 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || ||||||||| Sbjct 51977 CGGTTAAGGTTTTCACGAAAATCTGCATA 51949 >seq599 Length=174198 Score = 84.2 bits (92), Expect = 1e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| |||||||| ||||| ||| | || | || || ||||| Sbjct 69531 GTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGAGAGGGTGCGGCCGTCTTCGAGCTG 69590 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||| ||||| || || || |||||||||||| | || | ||||||||||| Sbjct 69591 TTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTGTC 69641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324619827520968