Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq3355 159 1e-34 seq372 143 9e-30 >seq3355 Length=30814 Score = 159 bits (176), Expect = 1e-34 Identities = 233/327 (71%), Gaps = 7/327 (2%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| |||||| |||||||| ||||||||||| || ||| | ||||| |||||||||| Sbjct 8742 ACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGT 8683 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||| ||||| ||||||||||| || || || | ||||| | ||| || ||| || Sbjct 8682 TCAACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGG 8623 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 ||||||| ||||||||||||||||||||| |||| | || |||||| |||||||| Sbjct 8622 TCGGCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGG 8563 Query 25000 CG--ACCGAACAACTGTCGCGCACGCACACGGGCTATCCGTGGCTGGCGCTGAATC---A 25054 | || | || || || ||| || | ||| || ||||| | || | | Sbjct 8562 TGGAACTG--CAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAA 8505 Query 25055 CCGCGACTCGATCTTCGAGTACACCGCCGACGACGTCATATTCCTCGGCTACCGGCCGCA 25114 | | ||||||||||| ||| ||| ||| || |||| | ||||| || || Sbjct 8504 GCCGGCGTCGATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCA 8445 Query 25115 CCCGGTCATCAAGGCCCCCGTGGCCGT 25141 |||| |||||||| |||||||| || Sbjct 8444 TCCGGCGATCAAGGCGCCCGTGGCGGT 8418 >seq372 Length=11520 Score = 143 bits (158), Expect = 9e-30 Identities = 141/181 (78%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 24832 GCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGA 24891 ||||| | |||||||||||| || ||| | ||||| |||||||||||||| ||||| | Sbjct 9946 GCTGCAA-CTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCA 10004 Query 24892 GCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCA 24951 |||| |||||||| ||||| | | ||| | || ||| ||| || ||||| |||| Sbjct 10005 GCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCA 10064 Query 24952 TCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAAC 25011 |||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| || | Sbjct 10065 TCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCAGC 10124 Query 25012 T 25012 | Sbjct 10125 T 10125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164166013609488