Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq1231 307 3e-79 seq1148 167 7e-37 seq1137 123 8e-24 >seq1231 Length=29534 Score = 307 bits (340), Expect = 3e-79 Identities = 591/857 (69%), Gaps = 22/857 (3%) Strand=Plus/Plus Query 5466 CCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTGCGGAAGA 5525 ||||| ||||| ||||| | || || ||| |||| | | |||||||| | | Sbjct 3249 CCTTGGTGACCGGCGTGTCGGCATAACCGCGTGAGCGGTCGCTTTGCGGCTTGCGCATCA 3308 Query 5526 TCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGTTCCGTCC 5585 ||||| ||| ||||| ||||| |||||||| ||||||||||| | || | Sbjct 3309 GCAGCACGTATTCGGGGCTGCCGCAGCCCATCTTCGTGCCGTCCTTCAGCATCTCGCTGT 3368 Query 5586 ACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTCTTCATGC 5645 |||| ||||||||||||||| ||||||||| || ||||||||||||| ||| |||||| Sbjct 3369 ACGACAGGCGGTAGGTCTGGTTGTTCTCGCGCACGACGTCGGTGACGACGGTGATCATGC 3428 Query 5646 CCATATAGGCCCAGCCATGCTTGACGAAG-GCTCGAGTCACTTCCATGTGGAAGGGGTAG 5704 |||| | |||| || | || |||||| ||||| |||||| || | | Sbjct 3429 CCATGAACTGGAAGCCGTGGCGCATATAGTGCTCGATGCACTTGGC-GTGGAACGGATTG 3487 Query 5705 ACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTCACGTGGATG 5764 |||||| | | || |||||||| | | ||| | ||| || ||||||||||||||| Sbjct 3488 ACGGTCGGCACACCCTCGCCGGTCACTGCACCGAACAGGATCCGGTCCTTCACGTGGATG 3547 Query 5765 CAGGCCAGAC-GCCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCAGATAGTCCATCTG 5823 ||||| || | |||||| | | | | || ||||| | ||| |||||| |||||||| Sbjct 3548 CAGGCGAGCCGGCCCGGCGCCAG-CGCACGGAGCAGGTTCGGCGTCAGATGATCCATCTG 3606 Query 5824 CTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTTCGGCGAGTACTC 5883 | ||||||| ||| ||| ||||| ||||||||||||||| |||| |||||| |||||| Sbjct 3607 CGCGAAGAAATGCCCGTCATCGTCCGTGTGGCCGAAGTCGTTGTAGCTCGGCGTGTACTC 3666 Query 5884 GTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTTGCTT--TCCATG 5941 ||| ||| ||||||| |||||| ||||| | ||| | ||| | | | ||| |||| Sbjct 3667 GTAGTGGTTGCTGAACGGGATGGAGGTGACGATCAGGTCGA--CCGATCCTTCGTCCAGC 3724 Query 5942 C-GGCAGGTT--TCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCCCTTGATC 5998 | ||||| | ||| ||| |||||||| | | || || | | ||| ||| | Sbjct 3725 CGGGCAGCCTCATCG---ACGCAGTCGTTGTGCGCCAGCGTCCAGCCGTCGCCAGTGACC 3781 Query 5999 TCGACGCGCTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCC-ATGGCG--GCCACG-GA 6054 || ||||| ||||| || ||||| |||| | ||| | |||| | || | Sbjct 3782 TCCTGCCGCTCGACGCCGATCGAGCGCTTGAG----CGCGCCGAGGGCGACGTCATGCTG 3837 Query 6055 CAGGCCGTACTGCTTGATGATCTCGGTCATGCGCTGAACCATGGTGTTGTGCTGCTGCCA 6114 |||||| || | ||||||||||| |||||| || | ||| || ||| Sbjct 3838 CAGGCCATATTCGCGGATGATCTCGGACATGCGGGCGCTCAGCTCCTCGTGACGCGCCCA 3897 Query 6115 CTTCCGTTCGAGTTGGCGGCGGATGTCGCGCTCGGCCTCGGTATAGATCAGGTCGATGCG 6174 |||| | || | ||| || || ||||| | |||| | ||| | ||||| Sbjct 3898 CTTCGCCTGCAGGTCGCGCACGACCTCCCGCTCAGTTTCGGCGTGGATGATGTCGACCTC 3957 Query 6175 CACACGGCCTGTCTGCAGGAATCGGTGCAGGCGGTGAATGGACTGGATGAAGTCGTTGAA 6234 || || | |||| |||| || || || ||||| || | |||||||||||||||||| Sbjct 3958 GACCGGGTGCGACTGCTGGAAGCGCTGGAGCCGGTGGATCGCCTGGATGAAGTCGTTGAA 4017 Query 6235 CTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCTGGAAGTTGCAGCCGCT 6294 ||||||||| | ||| | | | | ||| | |||||||||||| | |||| |||||| Sbjct 4018 CTTGAAGCCTACGCCGACGAACACGGCGCGGTGGCAGTGGCGCTGCAGGTTGGTGCCGCT 4077 Query 6295 GCCTGCGATCACTGGTT 6311 ||| ||||| |||| Sbjct 4078 GCCCAGCATCACCGGTT 4094 Score = 136 bits (150), Expect = 1e-27 Identities = 204/290 (70%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 6615 GGTCGGACGGTACTTCGTGCCAGCGGATGTCCAGTTCCGGTAGCGCGTAGCCTTCGTCGC 6674 |||| ||| | || ||||||||||| | | || | || || ||||||| ||||| | Sbjct 5392 GGTCAGACTGGACCTCGTGCCAGCGCACGGTGAGCGCGGGCAGATCGTAGCCGTCGTCAC 5451 Query 6675 TGAACCCGAGGTCGCTGGGGCGCTGAACGAAGATCGCCCAGGACGCCACCCACATCCAGA 6734 |||| ||||||||||| |||||||| | ||| | |||||| || ||||| ||||| Sbjct 5452 TGAATCCGAGGTCGCTCGGGCGCTGCAGGAAAACGGCCCAGCTATTCAGCCACAGCCAGA 5511 Query 6735 ACTCGCCCTCTTTGTGGGCATGGATGGTGAGTTGGTCGGCCTTCTCAGAGTTGCGTTTGA 6794 |||| || ||||| | | || |||||| | | | |||||||| |||||| | || Sbjct 5512 ACTCTTGTTCCTTGTGCGGGTAGAGGGTGAGATCGCCCGCCTTCTCGCTGTTGCGCTGGA 5571 Query 6795 AGAACCTGGTCTTGGCCTGGCCGACATCCATCACGCCGAGGAAGGCCGAGTAAGCCAGTA 6854 |||| | ||| || |||||| ||||||||||||||||| | | |||| | | Sbjct 5572 AGAAGCGGGTGAGCGCTTGGCCGGTGTCCATCACGCCGAGGAAACCGGCGTAATGGATCA 5631 Query 6855 GCTCGATGTATTCGTTCGGGCTTGGCGTGGCAGTGGCCACGTACCGGTAC 6904 |||| |||| ||| || || ||||| || || || | |||||| Sbjct 5632 GCTCCTTGTAGCGGTTGGGCGAGGGGGTGGCGGTCGCGACAAATCGGTAC 5681 Score = 123 bits (136), Expect = 8e-24 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 4959 GCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTCCA 5018 ||||||| ||| ||||| || |||| ||| |||||||| ||||| || || || Sbjct 2777 GCGCGCAT--CGGCACGGTGCCGAGGCCGCAGAACGGATCGAACACCAGCTCGCCGCGCA 2834 Query 5019 TGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCATTT 5078 | ||||| || |||| ||||||||||||||||||||| || ||||| | |||| | | Sbjct 2835 TAGAGTATCGCTCGATCAGCCGGTCGACGATGTCGAACTGGAGGGGGCAGACGTGCTTCT 2894 Query 5079 CCTGGCCCTTGCTGTACTGCTGGGCGTTGAGCGTCCGCATGCGGGCGACGTCGGTCCATA 5138 | |||||||| | ||||| | ||||||||||| |||| || ||| |||| ||| | Sbjct 2895 CGGCGCCCTTGCGGACCTGCTCGCCGTTGAGCGTCTGCATCCGCACGATGTCGTCCCACA 2954 Query 5139 CGTCCGGGTG 5148 |||| || || Sbjct 2955 CGTCGGGATG 2964 >seq1148 Length=21331 Score = 167 bits (184), Expect = 7e-37 Identities = 239/332 (72%), Gaps = 15/332 (5%) Strand=Plus/Minus Query 21195 TGAGCCTGCTGGTGGTGGACTACCTGCAGCTGCTG---GAGAGCTCCGGCAAGTCC-ACT 21250 || ||||| | |||||||||||||||||||| || | | ||| |||| | | || Sbjct 12101 TGGGCCTGATCGTGGTGGACTACCTGCAGCTCATGAGCGTGTCCTCGGGCATGAGCGACG 12042 Query 21251 CGCACCGAGG-AC----GTCAGCGACATGTCCCG---CCAGTGCAAGCTGCTGGCGATGG 21302 | |||| | || || |||| || ||||| || | ||| |||||| | || Sbjct 12041 AGAACCGCGCCACCGCGGTGGGCGAGATCTCCCGTGGCCTG---AAGGCGCTGGCCAAGG 11985 Query 21303 AGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA 21362 | || || ||| ||||||| |||||||||||| ||| | ||||| ||| | Sbjct 11984 AACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCGGCGTGGAGTCGCGCACCG 11925 Query 21363 ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATG 21422 ||||||| ||||||||| ||||||||||| || || || ||||||||||||||||| | Sbjct 11924 ACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCATCGAGCAGGACGCCGACG 11865 Query 21423 TGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCGCGGCGTGG 21482 | ||||||||| | ||||||||||| |||| || ||| || || | | |||||||| Sbjct 11864 TCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACTCCAAGGAGCCCGGCGTGG 11805 Query 21483 CTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 | ||| |||||||| ||||| || || ||| Sbjct 11804 CCGAGGTGATCATCAGCAAGCAGCGGAATGGC 11773 >seq1137 Length=21002 Score = 123 bits (136), Expect = 8e-24 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGAC 21371 |||||||| ||| |||||||||||||| ||| | |||||||||| | ||||||| | Sbjct 14976 TCCCCGTGCTCGCGCTGTCGCAGCTCAGCCGTGCGGTGGAGCAGCGCGAGGACAAGCGCC 15035 Query 21372 CGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGT 21431 || | |||| ||||| ||||| ||||| ||||||||||||||||||| || || || Sbjct 15036 CGCAGCTGTCCGACCTTCGCGAATCCGGCTCGATCGAGCAGGACGCCGACATGGTCTGGT 15095 Query 21432 TCGTGTACCGCGACGA 21447 |||||| |||||| || Sbjct 15096 TCGTGTTCCGCGAAGA 15111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157103905547034