Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq2277 196 9e-45 seq3075 168 1e-36 >seq2277 Length=5225 Score = 196 bits (216), Expect = 9e-45 Identities = 267/371 (72%), Gaps = 9/371 (2%) Strand=Plus/Minus Query 22987 TCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTTGGTGTG 23046 || |||||||||| || ||||| |||||||| || |||||| || || || || Sbjct 3540 TCGAAGAACAGAACCTGGGCGCAGCCTTCGCCCGCATAGATCTTGGCGGGAAGCGGCGTC 3481 Query 23047 GTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTT 23106 || ||||| |||||||| || | |||||| |||||| || || | |||||||||||| Sbjct 3480 GTGTTGGAGAACTCCAGCGTCACGTAGCCTTCCCATTCCGGCTCGAACGGCGTGACGTTG 3421 Query 23107 ACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACGC 23166 |||||||| ||||| || |||||||| ||||| |||||||| | |||| ||| Sbjct 3420 ACGATGATCCCGCAGCGGGCATACGTGCTCTTGCCCAGGCAGATGGTCAGCACGTTGCGC 3361 Query 23167 GGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGATCAGG 23226 || ||| ||||| ||| ||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 3360 GGGATGCGGAAGTACTCCAGCGTGCGGGCCAGCGCGAAGCTGTTGGGCGGGATGATGCAG 3301 Query 23227 CCTTGGCCGTTTGGAACGTGCTTCGTAACGAAATTGTCTTCGGTGAAATTCTTTGGATCG 23286 | | | || ||||| ||| ||||| | | ||| ||||||||| || || Sbjct 3300 ACGTCGTCG--TGGAA-----GTCG--ACGAAGCTCTTCTCGTCGAAATTCTTGGGGTCC 3250 Query 23287 ACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGAATATCGTAG 23346 || |||| | | | | |||||||| |||||||||||| |||| || || |||||| Sbjct 3249 ACCACCGTGCTGTGGATATTGGTGAACACCTTGAATTCGGGGGCGCAGCGGATGTCGTAG 3190 Query 23347 CCGTAGCTGGA 23357 || ||||| || Sbjct 3189 CCATAGCTCGA 3179 >seq3075 Length=32470 Score = 168 bits (186), Expect = 1e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTC 23079 ||||||||| ||||||| || ||||| ||||| || ||||| || | ||| | | Sbjct 13536 GCGTAGATCTTTGCCGGGAGCGGGGTGGTGTTGGAGAATTCCAGCGTCACATGGCCCTCC 13595 Query 23080 CATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTG 23139 || | || |||||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct 13596 CAGCCGGGCTCCAGCGGGGTGACGTTCACGATGATGCCGCAGCGCGCATAGGTCGATTTG 13655 Query 23140 CCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGT 23199 ||||||||||| || | ||||||||||| | | ||| | |||| |||| ||||| Sbjct 13656 CCGAGGCAGATGACCAGCACGTCACGCGGCACGCGGAAATATTCCACCGTGCGGGCCAGC 13715 Query 23200 GCGAAACTGTTCGGCGGAATGAT 23222 ||||| ||||| ||||| ||||| Sbjct 13716 GCGAAGCTGTTTGGCGGGATGAT 13738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897554543458480