Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq1349 145 3e-30 seq1247 98.7 4e-16 >seq1349 Length=8317 Score = 145 bits (160), Expect = 3e-30 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 9963 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 10022 |||||||||||||||||| |||||| |||||||||| ||||| ||||| || | || Sbjct 7589 CATGGCATCCGTCAACAAGGTCATCATCGTCGGCAACCTCGGGAAGGACCCCGAGATGCG 7648 Query 10023 CTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAA 10082 | | |||| ||||||| ||| |||| || | |||| || ||||| |||| || Sbjct 7649 CACCTTCCCCAGCGGCGGGCGGGTCTGCAACGTCACCATCGCCACCACCGAGCGCTGGAA 7708 Query 10083 GGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGG 10142 ||||||| |||||||||||||||||| ||| || ||||||||||| |||| | Sbjct 7709 GGACAAGCAGAGCGGCGAGATGAAGGAGCTGACGGAGTGGCACCGCGTGGTCTTCAATGA 7768 Query 10143 CCGCCTCGCCGAGAT 10157 |||||| |||||||| Sbjct 7769 CCGCCTGGCCGAGAT 7783 >seq1247 Length=8953 Score = 98.7 bits (108), Expect = 4e-16 Identities = 209/305 (69%), Gaps = 19/305 (6%) Strand=Plus/Plus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 ||| ||||| || || ||||||||||||||||| ||| || ||| | |||| ||| Sbjct 8246 CGTTAACAAGGTTATTCTCGTCGGCAATCTCGGGCGCGATCCCGAATCGCGCTCGTTCCA 8305 Query 10032 GAGCGGCGACGCAA--TCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGA---C 10086 || ||||| |||| | ||| | ||| |||| || | ||| ||| ||||| | Sbjct 8306 GAACGGCG--GCAAGGTGGTGAACCTGCGCATCGCGACCAGCGAAAGCTGGAAGGATCGC 8363 Query 10087 AAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCA-CCG--CGTCAGCTTCTTCGGC 10143 || || |||||| |||||| ||||||||||| || || | |||| || Sbjct 8364 AATTCG---GGCGAGCGCAAGGAAAAAACCGAATGGCATTCGGTCGCGATCTTCAACGAA 8420 Query 10144 CGCCTCGCCGAGATCGTCGACGAG---TACCTGCGCAAGGGCGCGCCGGTCTACATCGAG 10200 || | || || ||| | |||| | ||| |||||||| || |||||| |||||| Sbjct 8421 GGCTTGGC---GAACGTGGCCGAGCGCTTCCTACGCAAGGGGTCGAAGGTCTATATCGAG 8477 Query 10201 GGCCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAG 10260 |||| | | || || || ||||||||| | |||||||| ||||| |||||||| Sbjct 8478 GGCCAGCTGCAGACCCGCAAATGGCAGGATCAGAATGGCCAGGACCGCTATTCGACCGAG 8537 Query 10261 ATCGT 10265 |||| Sbjct 8538 GTCGT 8542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197780624029098