Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3158 131 1e-25 >seq3158 Length=82937 Score = 131 bits (144), Expect = 1e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || ||||||||||| || ||||| || | || || | |||| || | ||| Sbjct 51751 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAAGTTG 51692 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || || || ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 51691 TTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATTTT 51632 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| | || | ||||| || | ||| ||||| | |||| ||| |||||||| Sbjct 51631 CGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCGGT 51572 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||| ||||| || || |||||||| |||||||| Sbjct 51571 TAAGGTTTTCACGAAAATCTGCATACCACCGCGAAGA 51535 Score = 131 bits (144), Expect = 1e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || ||||||||||| || ||||| || | || || | |||| || | ||| Sbjct 52153 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAAGTTG 52094 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || || || ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 52093 TTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATTTT 52034 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| | || | ||||| || | ||| ||||| | |||| ||| |||||||| Sbjct 52033 CGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCGGT 51974 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||| ||||| || || |||||||| |||||||| Sbjct 51973 TAAGGTTTTCACGAAAATCTGCATACCACCGCGAAGA 51937 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| || || ||| || || || |||||||||| | || | | |||| Sbjct 52389 AAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCCATCT 52330 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||| || ||||| || | ||||||||||| || ||||| |||||||||||| Sbjct 52329 TCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTTATCT 52270 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| ||| || || | || | || || |||| ||| ||||| | || | ||| Sbjct 52269 TGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAATGGTT 52210 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || || || |||||||| Sbjct 52209 TTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 102 bits (112), Expect = 6e-17 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || ||||| ||||||||||| || || || |||| | || | | | || || Sbjct 51225 AACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTC 51166 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || ||||| ||||| || || || || || |||||||| || ||||| || Sbjct 51165 GAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTG 51106 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTC---AGACGTTTCCACTTCAAGAGTGACCGT 101436 || || || ||| | || | ||| || |||| ||||| || ||||||| || Sbjct 51105 GATCTTGGTCTTAACATTGTCGATAGTATCGCTAGAC---TCCACCTCGAGAGTGATGGT 51049 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || || || || || || || ||||||||||| Sbjct 51048 CTTTCCTGTCAAGGTCTTGACGAAAATCTGCATGGT 51013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396261588012717