Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019400.1 Length=147940 Score E Sequences producing significant alignments: (Bits) Value seq2374 86.0 6e-12 seq2529 84.2 2e-11 >seq2374 Length=1501 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 85031 TGGGGTATTAACTCAGCGGTTAGAGTAGCGGCCTCTTAAGCCGAAGGTCGAAGGTTCGAA 85090 |||| | ||| ||||| | ||||| ||||| ||||||| ||| |||||||||||||||| Sbjct 198 TGGGTTCTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAAGGTTCGAA 257 Query 85091 TCCTTCATGCCCCACCA 85107 ||||||| | ||||||| Sbjct 258 TCCTTCAGGACCCACCA 274 >seq2529 Length=4813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 90056 TCTGCACCTTCGGAGCGTAGCGCAGTCTGGTCAGCGTGGGTGCCTTGGATGCACTGGGTC 90115 || || ||||||||||||||||||||||||| |||| || |||| || ||||| Sbjct 4005 TCGGCGCCTTCGGAGCGTAGCGCAGTCTGGT-AGCGCATCTGGTTTGGGACCAGAGGGTC 3947 Query 90116 GCAGGTTCGAATCCTGCCGCTCCGACCAATT 90146 | ||||||||||||| |||||||||||||| Sbjct 3946 GTAGGTTCGAATCCTATCGCTCCGACCAATT 3916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473259406404000