Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq2716 172 8e-38 seq2378 129 8e-25 seq3387 84.2 3e-11 >seq2716 Length=3604 Score = 172 bits (190), Expect = 8e-38 Identities = 433/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Plus Query 84445 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAG 84504 || |||||| | ||| || || ||| |||||| ||||||| || |||| ||| Sbjct 1474 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 1533 Query 84505 GCCCAGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 84564 || | || || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 1534 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 1593 Query 84565 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCTCCGCA 84624 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 1594 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 1653 Query 84625 GAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 84684 || ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 1654 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1710 Query 84685 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 84735 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1711 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1770 Query 84736 CGCGTCGGCCTGCTTGCGCATGTGGGCGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 84794 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1771 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1830 Query 84795 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 84854 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1831 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1889 Query 84855 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 84911 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1890 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1946 Query 84912 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 84971 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1947 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 2006 Query 84972 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGG 85031 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 2007 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 2066 Query 85032 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 85077 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 2067 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 2112 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 86600 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 86659 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 2849 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 2908 Query 86660 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 86718 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 2909 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 2967 Query 86719 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 86778 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 2968 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 3024 Query 86779 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 86807 | ||||| |||||||| | |||||| Sbjct 3025 GGTCAGCAGCGCGTCGCGCGAATGATCGA 3053 Score = 87.8 bits (96), Expect = 2e-12 Identities = 345/535 (64%), Gaps = 27/535 (5%) Strand=Plus/Plus Query 86071 GTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCATCCGCGTCTCGATCAGCAGGCGCCA 86130 |||| |||| |||||| |||||||| || | |||||||||| |||| | | Sbjct 2185 GTCGGCGAAGACGATGTACGGCTCGCCGGTGGCGAGGCGCGTCTCGACCAGCTTCTGGAA 2244 Query 86131 CAGTTCGCGCGC---CCGCTCGACGCGGATCACCTCGCCGGTCTTGGGCGAGCGCAGGGC 86187 ||| ||||||| | || | |||| ||| |||| |||||| ||| | Sbjct 2245 CAGCGCGCGCGCGTCCACCTTGCCGCG---CACAGTGCCGTCCTTGGGGCTCTTCAGCTC 2301 Query 86188 GAACTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGTTGACGGCGTTGTG 86247 | ||| | ||||||||||||| |||||| | |||| | ||| ||| ||| Sbjct 2302 CCATTCGCCGCCGTCGCGCACCGCTTCCATGAAGGCATCGGGAATCAGCACGCCGTGGTG 2361 Query 86248 CAGGTTGGTGATCTTGCGGTTCTGGTCGCCGCCAGTAGGCTTGCGGGCCGTGATGAACTC 86307 |||||| ||||||||| |||||| | ||||||||| | || |||||| Sbjct 2362 CAGGTTCAGCGCCTTGCGGTTGAAGTCGCCC---GACGGCTTGCGGATCTCGAGGAACTC 2418 Query 86308 GCGGATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGCGTGCCGCC 86367 ||| |||||||| | ||| |||||| |||| ||||| || ||| ||| Sbjct 2419 CTCGATCTCCGGGTGCGAAACGTCGAGATAGCAGGCGGCCGAGCCGCGACGCAGCGAGCC 2478 Query 86368 TTGGCTGACGGCGAGAATCAGGCGATCGTCCACCGC---CATGAACGGGATCACGCCGGT 86424 ||||||| ||||| |||| ||| ||||| | | || || ||||| | |||| | Sbjct 2479 CTGGCTGATCGCGAGCGTCAG-CGA--GTCCATCACGCGCACAAAGGGGATGATGCCGCT 2535 Query 86425 CGACTGCGAACCCTTCGAGGTCTTC----TCGCCCAGGCCGCGCAGGGCGCCGTAATAGG 86480 | || || | |||| | | ||||| | |||||||| ||| |||||| Sbjct 2536 GGTCTTG----CCATTGAGGCCGACCGGCTCGCCGATGCCGCGCACATTGCCCCAATAGG 2591 Query 86481 AGCCGATGCCGCCGCCCATCGAC--GAGAGCCAGATGACCTCGTCATAGTGCTCGGAGAT 86538 ||||||||||||||| || | | ||||||| | ||||| || ||| ||| Sbjct 2592 TGCCGATGCCGCCGCC--GCGGCTGGCCAGCCAGACGTTCTCGTTCCAGGTATCGACGAT 2649 Query 86539 CGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGC 86593 | ||||||| | || | | || ||||| |||||||||||||||| Sbjct 2650 GCCGTTCAGGCTGTCGGGCACCGAGTTCAGATAGCAGCTGATCGGCAGGCCGCGC 2704 >seq2378 Length=14799 Score = 129 bits (142), Expect = 8e-25 Identities = 337/507 (66%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 83392 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGATTGCGAC 83451 ||||||||||||| | |||||| ||||||| |||||||||||| ||| | Sbjct 12866 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 12925 Query 83452 GCTGGAAGGACATCAGCAGAGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 83511 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 12926 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 12985 Query 83512 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 83565 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 12986 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 13036 Query 83566 TGAACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 83625 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 13037 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 13096 Query 83626 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 83684 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 13097 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 13155 Query 83685 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 83743 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 13156 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 13214 Query 83744 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 83803 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 13215 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 13274 Query 83804 CGTCAGCAGGGACTTCTCGTCCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTC 83863 |||||||||| ||||| |||||||||| ||| || || |||| | | Sbjct 13275 CGTCAGCAGGTTGCGCTCGTGATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCC 13334 Query 83864 CATGGGGGCTTCGTGCGGAAGCCAGTG 83890 || || |||| | || |||||||| Sbjct 13335 CAGCGGCACTTCCTCAGGCAGCCAGTG 13361 >seq3387 Length=24633 Score = 84.2 bits (92), Expect = 3e-11 Identities = 135/190 (71%), Gaps = 8/190 (4%) Strand=Plus/Minus Query 145100 CTTCAGGACCTTCAGCCAGGAGGCGACATAGGAGGCGTGATCCTC---ACGGACTTCCGG 145156 ||| |||||||| |||||| | ||| ||| || ||||| || | || | | || Sbjct 23402 CTTGAGGACCTTGAGCCAGCTGCCGAGGTAGCTCGCATGATCGTCGAGATGGTCGACTGG 23343 Query 145157 GGTCAACCCAAGAATGGCGCAGAGGAAGGCCGAGCCCAGTTCGGCGACCAGTTCCTCGGC 145216 || |||||| ||||| || | |||||| | || |||||||||||||||||| | Sbjct 23342 ---CAGCCCAAGTTCGGCGCCGATCATCGCCGAGGCGAGCTCGGCGACCAGTTCCTCGAC 23286 Query 145217 GGCGTAGGCCTCGTCCCCGAAGCGCTTGCCGAACTCGCGGTTCAGGCGGTCCTCGC-GAC 145275 |||||| || ||| ||||||||| || | | ||||| ||| ||| | ||| | | Sbjct 23285 GGCGTAAGCGTCGCTCCCGAAGCGAGCGCTCAGCGAGCGGTCCAGCCGG-CTTCGGTGCC 23227 Query 145276 CGGTCCAGTG 145285 |||||||||| Sbjct 23226 CGGTCCAGTG 23217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690113970109200