Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq2716 179 7e-40 seq149 89.7 9e-13 >seq2716 Length=3604 Score = 179 bits (198), Expect = 7e-40 Identities = 385/568 (68%), Gaps = 18/568 (3%) Strand=Plus/Plus Query 113546 CCAGGAAGGGGTTCTTCACGGGGAAGGAGCCCGACAGCGTCTTATGCAGATAGGCGTTGG 113605 |||| | |||||||| || | ||| ||||||||||||||| || ||| ||||| Sbjct 1557 CCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGG 1616 Query 113606 CGCGCCACGGCTCGATCGACGGCGAGGTATTGCCGCAGAGGATAGACGACGACGCGTTGG 113665 | | ||||||||| | | |||||| |||||||| ||| || ||||||| ||| Sbjct 1617 CCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGG 1676 Query 113666 GAGCGATCGCCATCTTGTGGGCGAAGCGCTCGCCCGTGCCGATCATGTCCGGCGCCTCG- 113724 | ||||||||||||||| | || ||||| | ||| |||||| | || ||| Sbjct 1677 GCGCGATCGCCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGG 1733 Query 113725 --------CCGCGTTCGGCGCCCAGCTTCAGAGAAGCGGCATCCGCCAGGGTGCGGATGT 113776 ||||| |||||| ||||| ||| || || || | || | | | || || Sbjct 1734 GGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTGACGT 1793 Query 113777 GCTTGAAGAT-CGCACGGTTCACGTTGCGAGCCTTATGCGACTCGAACCGG-ATCATATG 113834 |||||||||| |||| ||||| | | ||| | ||| || | ||| | | | Sbjct 1794 GCTTGAAGATGCGCA-GGTTCCAGCTCTTCGCCATG-GCGCCTTCCATCGGCAGCCCGCG 1851 Query 113835 CTTCTGAAGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGC 113894 | ||| || ||| ||||||||||| | ||||||||||||||| ||||| ||| || Sbjct 1852 CGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGC 1911 Query 113895 CGAGTAGATCGCGTAGGCCAACGCCGGCG-GAGCGTTGTCGATGAACACCTGGAGGCAGT 113953 || ||| |||| ||| ||||| | || |||||| | |||| || || Sbjct 1912 GGAATAGGCCGCGCGCTCCATGCCCGGCTCGTGCCG-GTCGATATAATCCTGCAGCACGT 1970 Query 113954 TGTCCAGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACT 114013 |||| || | ||||||| ||| |||||||| || ||| || ||||| ||| || Sbjct 1971 TGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACG 2030 Query 114014 TCTCGGCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGC 114073 ||||| ||| | ||||||||||||||| || || || | ||||| ||| || Sbjct 2031 TCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCGATCGTTGCCCAGATGGTCCT 2090 Query 114074 GCCCGGTCGCCAGCGTGATCTCGGTGCA 114101 || |||| ||||||||||||| |||| Sbjct 2091 TGCCCGTCGGCAGCGTGATCTCGCTGCA 2118 >seq149 Length=5882 Score = 89.7 bits (98), Expect = 9e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 71168 GAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCCTC 71227 ||||||| ||| | | ||||||||||||||||| | ||||||||||||| |||||| Sbjct 3119 GAGATCGCGCCTCTGGCATTCATGCGCGGGCGCACGCTGAACAACGCCTTCGTCATCCTC 3178 Query 71228 GACGAGGCTCAGAACGCGTCGTTCGACGACCTGGAACTGTTCGTGACCCGTACCGGTCAG 71287 |||||||| |||||| || || ||| | || | ||||| | ||||| | ||| | Sbjct 3179 GACGAGGCCCAGAACACGACGCCCGAGCAGATGAAGATGTTCCTCACCCGCATCGG-CTT 3237 Query 71288 GGTTCGCAAGT-CGTGATCTGCGGCGATCCCGGCCAGATCGACATCCCGAA 71337 | |||||| |||| | ||||| | ||||||||||| | || || Sbjct 3238 CGGCAGCAAGTGCGTGGTGACAGGCGACGTCAGCCAGATCGACCTGCCCAA 3288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895727422964520