Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq2716 163 4e-35 seq2378 141 1e-28 >seq2716 Length=3604 Score = 163 bits (180), Expect = 4e-35 Identities = 431/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Plus Query 83162 GAAGTGCTGGATCGAACCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 83221 || |||||| | ||| || || ||| ||| || ||||||| || |||| | | Sbjct 1474 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 1533 Query 83222 GCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 83281 || | ||| || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 1534 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 1593 Query 83282 AGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGCA 83341 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 1594 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 1653 Query 83342 AAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 83401 | ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 1654 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1710 Query 83402 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 83452 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1711 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1770 Query 83453 CGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 83511 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1771 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1830 Query 83512 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 83571 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1831 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1889 Query 83572 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 83628 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1890 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1946 Query 83629 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 83688 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1947 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 2006 Query 83689 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAAAGGCAGCAGACGGCGG 83748 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 2007 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 2066 Query 83749 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 83794 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 2067 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 2112 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 85317 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 85376 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 2849 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 2908 Query 85377 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 85435 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 2909 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 2967 Query 85436 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 85495 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 2968 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 3024 Query 85496 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 85524 | ||||| |||||||| | |||||| Sbjct 3025 GGTCAGCAGCGCGTCGCGCGAATGATCGA 3053 >seq2378 Length=14799 Score = 141 bits (156), Expect = 1e-28 Identities = 342/509 (67%), Gaps = 23/509 (5%) Strand=Plus/Plus Query 82109 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGC 82168 ||||||||||||| | |||||| ||||||| |||||||||||| |||| || Sbjct 12866 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 12925 Query 82169 GCTGGAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 82228 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 12926 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 12985 Query 82229 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 82282 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 12986 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 13036 Query 82283 TGAACATGTACTCGTGCTTTTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 82342 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 13037 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 13096 Query 82343 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 82401 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 13097 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 13155 Query 82402 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 82460 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 13156 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 13214 Query 82461 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 82520 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 13215 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 13274 Query 82521 CGTCAGCAGGGACTTCTCGT--TCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGG 82578 |||||||||| ||||| ||| |||||||||| ||| || || |||| | Sbjct 13275 CGTCAGCAGGTTGCGCTCGTGATCG--GTCAGCTTCTGCGCCCAATCACGGCAATCCTCG 13332 Query 82579 TCCATGGGGGCTTCGTGCGGAAGCCAGTG 82607 ||| || |||| | || |||||||| Sbjct 13333 CCCAGCGGCACTTCCTCAGGCAGCCAGTG 13361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700414321895640