Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq2716 174 2e-38 seq2378 138 2e-27 >seq2716 Length=3604 Score = 174 bits (192), Expect = 2e-38 Identities = 380/559 (68%), Gaps = 30/559 (5%) Strand=Plus/Plus Query 84636 GGTTCTTGACCTGGAACGAACCCGAGAGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGG 84695 ||||||||||| ||| ||||| || |||||||| | || ||||||| || | | Sbjct 1566 GGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGGCCGGGATCG 1625 Query 84696 GCTCGATCGACGGCGAAGCGCCGCCGCAGAGGATCGACGAGGAGGCGTTGGGGGCCACCG 84755 ||||||| | | ||| | ||||||||||| |||||| || ||| |||| || | || Sbjct 1626 GCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGGGCGCGATCG 1685 Query 84756 CCAGCTTGTGGGCGAAGCGCTCGCCCGAGCCTTCCATGTCAGGGGCCTCG---------C 84806 ||| |||| | || ||||| | ||| |||||| | ||| ||| | Sbjct 1686 CCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGGGGCAGGGGC 1742 Query 84807 CGCGCTCGGCGCCCAGGACCAGCGACGCCGCGTCGGCCTT-GCGGCGCATGTGGCGGAAG 84865 ||||||||||| |||| || ||||||| | ||| ||| | | ||| |||| Sbjct 1743 CGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTG-ACGTGCTTGAAG 1801 Query 84866 ATGGTCTTATTG-AGCGTCTCGGCCGCCATG---CTCTCGAACGGGATGTCGAGCGACTG 84921 ||| | || ||| ||| ||||||| | || | ||| | || ||| ||| Sbjct 1802 ATGCGCAGGTTCCAGC-TCTT---CGCCATGGCGCCTTCCATCGGCAGCCCGCGCGCCTG 1857 Query 84922 GAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTA 84981 ||| | ||||||||||||| | ||||||||| ||||||||||||||| | ||| || Sbjct 1858 GAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGCGGAATA 1917 Query 84982 GGAGGCCCGGTGCATCTCGTCCGGCGCGTT---GTCGATGAACACCTGGAGGCAGTTGTC 85038 || || || | ||| | ||||| ||| |||||| | |||| || |||||| Sbjct 1918 GGCCGCGCGCTCCAT---GCCCGGCTCGTGCCGGTCGATATAATCCTGCAGCACGTTGTC 1974 Query 85039 CAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGATCCTTCCATTCGACCCACTTTTC 85098 || | |||||||| ||| |||||||| | || |||||||| | | ||||| | || Sbjct 1975 GAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACGTCTC 2034 Query 85099 GGCGTTGACGCTCGACAGGCAGCAGACGGCCGTGCGCATC-TTGCCGAACACGTCGCGGC 85157 | ||| | |||||||||||||||||| ||||| ||| ||||| | ||| || Sbjct 2035 GAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCG-ATCGTTGCCCAGATGGTCCTTGC 2093 Query 85158 CGGTGCCCAGCATGATCTC 85176 | || |||| ||||||| Sbjct 2094 CCGTCGGCAGCGTGATCTC 2112 Score = 100 bits (110), Expect = 4e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 86704 GCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGAGGTTCGAGACGTATTCGTA 86763 ||||||||||||||||| ||| || ||| ||||||||| ||| |||||| || || || Sbjct 2848 GCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATA 2907 Query 86764 CAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCG-CGCGCGCGAAGGCCT 86822 | ||||| ||||| ||||||| || ||| ||| ||| || |||| | ||| | Sbjct 2908 GATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGAT 2966 Query 86823 CCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGT 86882 |||| ||| ||| || |||||||||||||| || | | |||| | ||| | Sbjct 2967 CCTGATAGGA---TTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAAT 3023 Query 86883 CGTCGAGCAGGGCGTCGCGGGTGAGATCGA 86912 || ||||| |||||||| | |||||| Sbjct 3024 CGGTCAGCAGCGCGTCGCGCGAATGATCGA 3053 >seq2378 Length=14799 Score = 138 bits (152), Expect = 2e-27 Identities = 533/819 (65%), Gaps = 40/819 (5%) Strand=Plus/Plus Query 83276 CCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGAC 83335 ||| | |||||||||||||||||| ||||||||| | |||| |||||| | ||||| || Sbjct 12654 CCGCCAGTCGGCGATGTAGCGGATATACTTCTTGATATCCTTGGGCGTCATGCCGTTCAC 12713 Query 83336 CTCGCCCAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCATCCGGCGGCC 83395 | |||| ||||||| |||||||||| ||| || || || | ||| Sbjct 12714 CGGCCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGCCGGATGGTGGTCTGGCA 12773 Query 83396 GGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAA 83455 | ||| ||| | ||| | | | | || |||| | | |||||| | || Sbjct 12774 CACATCGGCAATGTCGTCCTTCACCGCCTTGGTC-AGGCACT--GACGCTCCTGGCAGAA 12830 Query 83456 CTCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTC 83515 |||| | | ||| |||| |||| || || |||||||||| | |||||| Sbjct 12831 GGCGTGGAACATGCGGATGATGCCCTCGCAATGCAGGCTCTCGTCGCGCACCGACCAGCT 12890 Query 83516 GACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAA 83575 ||||||| ||||||||||||| | | ||| | ||||||| |||| ||||| Sbjct 12891 GACGATCTGCCCCATGCCCTTCATCTTGTTGAAGCGCGGAAAGTTCATGAGCATCGCGAA 12950 Query 83576 CGAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAG 83635 ||| | ||| ||||||| ||| ||| |||| | ||||| ||||| || || | Sbjct 12951 CGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGCGAG-----CG-TCCG 13004 Query 83636 GTCGGCGATCGACGTGCCGCTCTCG-CGCTCGAA------CATGTACTCGTGCTTTTCAC 83688 | || ||| | | |||| ||| ||| |||| |||||| || ||||| || Sbjct 13005 GGCGAT-ATCCTCAT--CGCTGTCGACGC-CGAAGTTCTGCATGTAATCATGCTTGTCCT 13060 Query 83689 GCATCGCCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGA 83748 || | | ||| || ||||| |||| | ||| || |||| ||| | ||||||| Sbjct 13061 TCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCATGCCGATCGTGTCGA 13120 Query 83749 TCAGGGTGGC-GTAGGCGNNNNNNNNNNNNNNNTCG--GCCGCCATGAACGAGGCCAGCA 83805 |||| |||| |||||| || | || |||||| || ||||| Sbjct 13121 GCAGG-TGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGC--TGAACGCGGTCAGCA 13177 Query 83806 TCATCCGCACCTCCGGGTGCGGGAAG-CGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCC 83864 ||||| | ||| | || ||| ||||| ||||| || ||| |||| | | Sbjct 13178 TCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGATAGCAATCCTGC 13236 Query 83865 ACATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTG 83924 || ||||| || |||||||||||||||||||||| ||||| ||| |||| |||| || Sbjct 13237 ACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGGTTGCGCTCG-TG 13295 Query 83925 GGC-TTGAGCTTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAG 83983 | | ||||||| ||| || || || | ||| |||| | || | || || Sbjct 13296 ATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCCCAGCGGCACTTCCTCAGGCAG 13355 Query 83984 CCAGTGGAGCGATTGCATGA----TCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGG 84039 |||||||||| ||| ||| ||| || ||| | |||||||| || |||| | Sbjct 13356 CCAGTGGAGCTGCTGC-TGACGCTTCCAATA---TTCGAACGCCCAGGGATATTCGAAAG 13411 Query 84040 GCTTGTAGTAGTCGCGCGGCTTG-AGCAGGGACATGTGT 84077 ||||||| | | | | |||||| || |||| |||| || Sbjct 13412 GCTTGTACTGCTTG-GAGGCTTGAAGGAGGGGCATGGGT 13449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715744854796800