Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq2716 174 2e-38
seq2378 138 2e-27
>seq2716
Length=3604
Score = 174 bits (192), Expect = 2e-38
Identities = 380/559 (68%), Gaps = 30/559 (5%)
Strand=Plus/Plus
Query 84636 GGTTCTTGACCTGGAACGAACCCGAGAGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGG 84695
||||||||||| ||| ||||| || |||||||| | || ||||||| || | |
Sbjct 1566 GGTTCTTGACCGCGAAACTGCCCGACAGCGTCTTGTGGGTGTAGATGTTGGCCGGGATCG 1625
Query 84696 GCTCGATCGACGGCGAAGCGCCGCCGCAGAGGATCGACGAGGAGGCGTTGGGGGCCACCG 84755
||||||| | | ||| | ||||||||||| |||||| || ||| |||| || | ||
Sbjct 1626 GCTCGATGCAGGCCGAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTGGGCGCGATCG 1685
Query 84756 CCAGCTTGTGGGCGAAGCGCTCGCCCGAGCCTTCCATGTCAGGGGCCTCG---------C 84806
||| |||| | || ||||| | ||| |||||| | ||| ||| |
Sbjct 1686 CCATCTTGCACGAAAAACGCTCCATCACGCC---CATGTCGGCGGCGTCGGGGCAGGGGC 1742
Query 84807 CGCGCTCGGCGCCCAGGACCAGCGACGCCGCGTCGGCCTT-GCGGCGCATGTGGCGGAAG 84865
||||||||||| |||| || ||||||| | ||| ||| | | ||| ||||
Sbjct 1743 CGCGCTCGGCGGCCAGCGTCATCGACGCCTGATTCACCTGCGCGTTG-ACGTGCTTGAAG 1801
Query 84866 ATGGTCTTATTG-AGCGTCTCGGCCGCCATG---CTCTCGAACGGGATGTCGAGCGACTG 84921
||| | || ||| ||| ||||||| | || | ||| | || ||| |||
Sbjct 1802 ATGCGCAGGTTCCAGC-TCTT---CGCCATGGCGCCTTCCATCGGCAGCCCGCGCGCCTG 1857
Query 84922 GAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTA 84981
||| | ||||||||||||| | ||||||||| ||||||||||||||| | ||| ||
Sbjct 1858 GAGGAAGGAGTGGAAGCCCATGACGCCCAGGCCGACCGAGCGCTCGCGCGCCGCGGAATA 1917
Query 84982 GGAGGCCCGGTGCATCTCGTCCGGCGCGTT---GTCGATGAACACCTGGAGGCAGTTGTC 85038
|| || || | ||| | ||||| ||| |||||| | |||| || ||||||
Sbjct 1918 GGCCGCGCGCTCCAT---GCCCGGCTCGTGCCGGTCGATATAATCCTGCAGCACGTTGTC 1974
Query 85039 CAGCATGCGCATCAGGTCTTCGATGAAGGTCGGGTGATCCTTCCATTCGACCCACTTTTC 85098
|| | |||||||| ||| |||||||| | || |||||||| | | ||||| | ||
Sbjct 1975 GAGGAAGCGCATCACGTCCTCGATGAACTGCTTGTCGTCCTTCCACTGGTCCCACGTCTC 2034
Query 85099 GGCGTTGACGCTCGACAGGCAGCAGACGGCCGTGCGCATC-TTGCCGAACACGTCGCGGC 85157
| ||| | |||||||||||||||||| ||||| ||| ||||| | ||| ||
Sbjct 2035 GAGGTTCAGCGACGACAGGCAGCAGACGGCGGTGCG-ATCGTTGCCCAGATGGTCCTTGC 2093
Query 85158 CGGTGCCCAGCATGATCTC 85176
| || |||| |||||||
Sbjct 2094 CCGTCGGCAGCGTGATCTC 2112
Score = 100 bits (110), Expect = 4e-16
Identities = 150/210 (71%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 86704 GCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGAGGTTCGAGACGTATTCGTA 86763
||||||||||||||||| ||| || ||| ||||||||| ||| |||||| || || ||
Sbjct 2848 GCCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATA 2907
Query 86764 CAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCG-CGCGCGCGAAGGCCT 86822
| ||||| ||||| ||||||| || ||| ||| ||| || |||| | ||| |
Sbjct 2908 GATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGAT 2966
Query 86823 CCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGT 86882
|||| ||| ||| || |||||||||||||| || | | |||| | ||| |
Sbjct 2967 CCTGATAGGA---TTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAAT 3023
Query 86883 CGTCGAGCAGGGCGTCGCGGGTGAGATCGA 86912
|| ||||| |||||||| | ||||||
Sbjct 3024 CGGTCAGCAGCGCGTCGCGCGAATGATCGA 3053
>seq2378
Length=14799
Score = 138 bits (152), Expect = 2e-27
Identities = 533/819 (65%), Gaps = 40/819 (5%)
Strand=Plus/Plus
Query 83276 CCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGAC 83335
||| | |||||||||||||||||| ||||||||| | |||| |||||| | ||||| ||
Sbjct 12654 CCGCCAGTCGGCGATGTAGCGGATATACTTCTTGATATCCTTGGGCGTCATGCCGTTCAC 12713
Query 83336 CTCGCCCAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCATCCGGCGGCC 83395
| |||| ||||||| |||||||||| ||| || || || | |||
Sbjct 12714 CGGCCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGCCGGATGGTGGTCTGGCA 12773
Query 83396 GGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAA 83455
| ||| ||| | ||| | | | | || |||| | | |||||| | ||
Sbjct 12774 CACATCGGCAATGTCGTCCTTCACCGCCTTGGTC-AGGCACT--GACGCTCCTGGCAGAA 12830
Query 83456 CTCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTC 83515
|||| | | ||| |||| |||| || || |||||||||| | ||||||
Sbjct 12831 GGCGTGGAACATGCGGATGATGCCCTCGCAATGCAGGCTCTCGTCGCGCACCGACCAGCT 12890
Query 83516 GACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAA 83575
||||||| ||||||||||||| | | ||| | ||||||| |||| |||||
Sbjct 12891 GACGATCTGCCCCATGCCCTTCATCTTGTTGAAGCGCGGAAAGTTCATGAGCATCGCGAA 12950
Query 83576 CGAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAG 83635
||| | ||| ||||||| ||| ||| |||| | ||||| ||||| || || |
Sbjct 12951 CGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGCCGAACATGGCGAG-----CG-TCCG 13004
Query 83636 GTCGGCGATCGACGTGCCGCTCTCG-CGCTCGAA------CATGTACTCGTGCTTTTCAC 83688
| || ||| | | |||| ||| ||| |||| |||||| || ||||| ||
Sbjct 13005 GGCGAT-ATCCTCAT--CGCTGTCGACGC-CGAAGTTCTGCATGTAATCATGCTTGTCCT 13060
Query 83689 GCATCGCCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGA 83748
|| | | ||| || ||||| |||| | ||| || |||| ||| | |||||||
Sbjct 13061 TCAGCTCGGCATATTCGAGGAACGCGCCATATTCGCTTTCCGGCATGCCGATCGTGTCGA 13120
Query 83749 TCAGGGTGGC-GTAGGCGNNNNNNNNNNNNNNNTCG--GCCGCCATGAACGAGGCCAGCA 83805
|||| |||| |||||| || | || |||||| || |||||
Sbjct 13121 GCAGG-TGGCTGTAGGCCGCGATGTGCACCGTTTCCATGTTGC--TGAACGCGGTCAGCA 13177
Query 83806 TCATCCGCACCTCCGGGTGCGGGAAG-CGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCC 83864
||||| | ||| | || ||| ||||| ||||| || ||| |||| | |
Sbjct 13178 TCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTATTTCTCGTGATAGCAATCCTGC 13236
Query 83865 ACATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTG 83924
|| ||||| || |||||||||||||||||||||| ||||| ||| |||| |||| ||
Sbjct 13237 ACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTGCGTCAGCAGGTTGCGCTCG-TG 13295
Query 83925 GGC-TTGAGCTTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAG 83983
| | ||||||| ||| || || || | ||| |||| | || | || ||
Sbjct 13296 ATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCCCAGCGGCACTTCCTCAGGCAG 13355
Query 83984 CCAGTGGAGCGATTGCATGA----TCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGG 84039
|||||||||| ||| ||| ||| || ||| | |||||||| || |||| |
Sbjct 13356 CCAGTGGAGCTGCTGC-TGACGCTTCCAATA---TTCGAACGCCCAGGGATATTCGAAAG 13411
Query 84040 GCTTGTAGTAGTCGCGCGGCTTG-AGCAGGGACATGTGT 84077
||||||| | | | | |||||| || |||| |||| ||
Sbjct 13412 GCTTGTACTGCTTG-GAGGCTTGAAGGAGGGGCATGGGT 13449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715744854796800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |