Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq2716 167 3e-36 seq2378 138 2e-27 >seq2716 Length=3604 Score = 167 bits (184), Expect = 3e-36 Identities = 432/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Plus Query 84571 GAAGTGCTGGATCGAGCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 84630 || |||||| | ||| || || ||| ||| || ||||||| || |||| | | Sbjct 1474 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 1533 Query 84631 GCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 84690 || | ||| || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 1534 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 1593 Query 84691 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGCA 84750 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 1594 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 1653 Query 84751 GAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 84810 || ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 1654 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1710 Query 84811 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 84861 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1711 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1770 Query 84862 CGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 84920 | | ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1771 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1830 Query 84921 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 84980 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1831 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1889 Query 84981 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 85037 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1890 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1946 Query 85038 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 85097 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1947 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 2006 Query 85098 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGG 85157 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 2007 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 2066 Query 85158 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 85203 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 2067 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 2112 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 86726 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 86785 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 2849 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 2908 Query 86786 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 86844 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 2909 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 2967 Query 86845 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 86904 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 2968 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 3024 Query 86905 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 86933 | ||||| |||||||| | |||||| Sbjct 3025 GGTCAGCAGCGCGTCGCGCGAATGATCGA 3053 >seq2378 Length=14799 Score = 138 bits (152), Expect = 2e-27 Identities = 339/507 (67%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 83518 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGC 83577 ||||||||||||| | |||||| ||||||| |||||||||||| |||| || Sbjct 12866 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 12925 Query 83578 GCTGGAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCG 83637 || | ||| ||| |||| ||||| |||| ||| ||||||| |||||| |||| | Sbjct 12926 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 12985 Query 83638 AGAACACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 83691 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 12986 CGAACATGGCGAG------CGTCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 13036 Query 83692 TGAACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 83751 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 13037 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 13096 Query 83752 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATGTGGTTGGCCTCG 83810 || |||| ||| | ||||||| ||| || | |||||| ||||||| | || Sbjct 13097 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 13155 Query 83811 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 83869 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 13156 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 13214 Query 83870 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 83929 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 13215 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 13274 Query 83930 CGTCAGCAGGGACTTCTCGTCCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTC 83989 |||||||||| ||||| |||||||||| ||| || || |||| | | Sbjct 13275 CGTCAGCAGGTTGCGCTCGTGATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCC 13334 Query 83990 CATGGGGGCTTCGTGCGGAAGCCAGTG 84016 || || |||| | || |||||||| Sbjct 13335 CAGCGGCACTTCCTCAGGCAGCCAGTG 13361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709690718238880