Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq2716 172 8e-38 seq2378 129 8e-25 >seq2716 Length=3604 Score = 172 bits (190), Expect = 8e-38 Identities = 433/648 (67%), Gaps = 24/648 (4%) Strand=Plus/Plus Query 83728 GAAGTGCTGGATCGACCCCTCGGCCGCGACGATCGACTTCCAGACCGCCTCGGTGTCCAG 83787 || |||||| | |||||| || ||| ||| || ||||||| || |||| | | Sbjct 1474 GAGGTGCTGCACCGACCCGCCGTGTTCGAGGATTGAGCTCCAGACGGCTTCGGAATTCTT 1533 Query 83788 GCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAG 83847 || | ||| || |||| | ||| | |||||||||| ||||| ||||||||| Sbjct 1534 GCTCTTCTCGTTGAGCAGCTTTTCCAGATACGGGTTCTTGACCGCGAAACTGCCCGACAG 1593 Query 83848 GGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGCA 83907 |||||||| | || |||||||||||||||||||||| | | ||||||||| ||||| Sbjct 1594 CGTCTTGTGGGTGTAGATGTTGGCCGGGATCGGCTCGATGCAGGCCGAGGTGCCGCCGCA 1653 Query 83908 AAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCGT 83967 | ||||||| ||| ||| ||||||| | |||| |||| | || |||| || | Sbjct 1654 GATGATCGAGATCGACGCGGTGGGCGCGATCGCCATCTTGCACGAAAAACGCT---CCAT 1710 Query 83968 GCCTTCCATGTC--CGGCGCC-------TCGCCGCGCTCCTTGCCCAGCAGCAGGGAAGC 84018 | ||||||| ||||| | ||||||||| | ||||| || || || Sbjct 1711 CACGCCCATGTCGGCGGCGTCGGGGCAGGGGCCGCGCTCGGCGGCCAGCGTCATCGACGC 1770 Query 84019 CGCATCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTT-CAGCCGGCGGGCGGCGT 84077 | || ||||| | | ||| ||| | |||||| |||| | | | Sbjct 1771 CTGATTCACCTGCGCGTTGACGTGCTTGAAGATGCGCAGGTTCCAGCTCTTCGCCATGGC 1830 Query 84078 GACTCTCGAACGGGATGTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCAGGCCCAGGC 84137 | || || | ||| | | || |||||| | ||||||||||| | | |||||||| Sbjct 1831 GCCT-TCCATCGGCAGCCCGCGCGCCTGGAGGAAGGAGTGGAAGCCCATGACGCCCAGGC 1889 Query 84138 CCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCGGCGCGT--- 84194 | ||||| || |||||| | ||| ||||| ||||| | ||| | ||||| ||| Sbjct 1890 CGACCGAGCGCTCGCGCGCCGCGGAATAGGCCGCGCGCTCCAT---GCCCGGCTCGTGCC 1946 Query 84195 TGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGAAGGTCG 84254 |||||| | |||| || |||||| || | ||||| || ||| |||||||| | Sbjct 1947 GGTCGATATAATCCTGCAGCACGTTGTCGAGGAAGCGCATCACGTCCTCGATGAACTGCT 2006 Query 84255 GGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGACGGCGG 84314 || ||| ||||| |||| ||||| ||| | || |||||||||||||||| Sbjct 2007 TGTCGTCCTTCCACTGGTCCCACGTCTCGAGGTTCAGCGACGACAGGCAGCAGACGGCGG 2066 Query 84315 TCCGCATC-TTGCCGAAGAT-GTCGCGGCCCGAGCCCAGCATGATCTC 84360 | || ||| ||||| |||| ||| ||||| |||| ||||||| Sbjct 2067 TGCG-ATCGTTGCC-CAGATGGTCCTTGCCCGTCGGCAGCGTGATCTC 2112 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 85883 CCGCCGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAG 85942 |||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||| Sbjct 2849 CCGCCGTTCGACAGCACCGGCGTTGCGGGCATGAACCACAGGCGCGAGACATAGTCATAG 2908 Query 85943 AGCCGCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCGCACTCG-CGCGCGCGAAGGCCTC 86001 | ||||| ||||| ||||||| || || ||| ||| || |||| | ||| || Sbjct 2909 ATGCGCTGCGCGTGCGCGGCGTCGTCGGCATAGG-CGCTGGCGACGCGGACAAAGAGATC 2967 Query 86002 CTGGGGCGAGCTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTCTGAAGGGTGAAGTC 86061 || | || ||| || |||||||||||||| || | | |||| | ||| || Sbjct 2968 CT---GATAGGATTCGCCCGGCAGCAGATAGCGGTCCTGCAACGTCTCCTTGCCGAAATC 3024 Query 86062 GTCGAGCAGGGCGTCGCGGGTGAGATCGA 86090 | ||||| |||||||| | |||||| Sbjct 3025 GGTCAGCAGCGCGTCGCGCGAATGATCGA 3053 >seq2378 Length=14799 Score = 129 bits (142), Expect = 8e-25 Identities = 337/507 (66%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 82675 GGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGC 82734 ||||||||||||| | |||||| ||||||| |||||||||||| |||| || Sbjct 12866 GGCTCTCGTCGCGCACCGACCAGCTGACGATCTGCCCCATGCCCTTCATCTTGTTGAAGC 12925 Query 82735 GCTGGAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCCCCGAAGGCCG 82794 || | ||| ||| |||| ||||| |||| ||| ||||||| ||||| |||| | Sbjct 12926 GCGGAAAGTTCATGAGCATCGCGAACGACGCGAACAGCTGCACGCCCTCGGTGAAGCCGC 12985 Query 82795 AGAACACGGCGATCTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTC----CCGA--T 82848 ||||| ||||| | || || ||||| | ||||||| |||| | Sbjct 12986 CGAACATGGCGAGCG------TCCGG---GCGATATCCTCATCGCTGTCGACGCCGAAGT 13036 Query 82849 TGAACATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGA 82908 | |||||| || ||||| || || | | | || |||||||| |||| | ||| Sbjct 13037 TCTGCATGTAATCATGCTTGTCCTTCAGCTCGGCATATTCGAGGAACGCGCCATATTCGC 13096 Query 82909 CCTCGGGCAGGCCCAGGGTGTCGATCAGCGTCGA-GTAGGCGTCGATATGGTTGGCCTCG 82967 || |||| ||| | ||||||| ||| || | |||||| |||| || | || Sbjct 13097 TTTCCGGCATGCCGATCGTGTCGAGCAG-GTGGCTGTAGGCCGCGATGTGCACCGTTTCC 13155 Query 82968 GCGGCGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAG-CGCGGGCCGTA 83026 | | |||||||| |||||||||| | || | || ||| ||||| ||||| Sbjct 13156 ATGTTGCTGAACGCGGTCAGCATCATCTTGATCTCGGTCGGCTTGAACACGCGG-CCGTA 13214 Query 83027 CTTCTCGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTG 83086 |||||| |||| | ||| ||||| || |||||||||||||| ||||||| || Sbjct 13215 TTTCTCGTGATAGCAATCCTGCACCTCGACATCCGCCTGGGTGAAGAAGCGGAAGATCTG 13274 Query 83087 CGTCAGCAGGGACTTCTCGTCCGGCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTC 83146 |||||||||| ||||| |||||||||| ||| || || |||| | | Sbjct 13275 CGTCAGCAGGTTGCGCTCGTGATCGGTCAGCTTCTGCGCCCAATCACGGCAATCCTCGCC 13334 Query 83147 CATGGGGGCTTCGTGCGGAAGCCAGTG 83173 || || |||| | || |||||||| Sbjct 13335 CAGCGGCACTTCCTCAGGCAGCCAGTG 13361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701332681933760