Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2399 98.7 2e-15 >seq2399 Length=446898 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||||||||||| |||| | || ||||| || ||| || | || |||| Sbjct 271502 AGAGGAGACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGA 271561 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || || |||||||| | || | || || | ||||||||| | ||||| |||||| Sbjct 271562 AGGTAAGGCCAGGCATAAGACCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCAC 271621 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||| || ||||| || ||||| || || |||| || |||||| | |||| Sbjct 271622 TGAAGAAAATACCCTCGACGGCCGCAAAGGCAACCAGCCGCTGAGCGAAAG-TGGATTCT 271680 Query 48303 T-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 | |||| |||||| || |||||||| |||||||| Sbjct 271681 TGGTCTTGGATCCATCGAATGGCCCAGTCAGCCTTCTT 271718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931492266679040