Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3224 127 1e-24 >seq3224 Length=193136 Score = 127 bits (140), Expect = 1e-24 Identities = 309/468 (66%), Gaps = 0/468 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| |||||||| || ||| ||| | || |||||||| | ||| || ||||| || Sbjct 110200 ATTAGGACAGAACAATGTCCATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGG 110141 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 | |||| | ||| || | ||| | ||||||| ||| || |||||||| ||||| Sbjct 110140 AGTCCAAAGAGCAAGGAAAAGATCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACG 110081 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 ||||| | || || |||||||| |||||||| ||||| | |||||| || || ||| Sbjct 110080 AAGATCCAGAAACTCGAAAATATCGGAGTGCCAAGGTTCAAGATAGATGGCGAAGGCACC 110021 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | | || ||||||||||| ||||||| || || | || || || | ||| Sbjct 110020 TGGCCGCTTATTGCCACCTTGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCAT 109961 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 ||||| | ||| | || | || || || | ||| | ||| || |||| | || Sbjct 109960 AGGAACGATCCCATTGGAGGAGCCATTCGTTCCTGCAATGTAGGAACCAGTCGCACGGAT 109901 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAAC 26247 | ||| ||| || ||| || |||||||| ||| ||||| ||||| | | Sbjct 109900 ACGATGAACATTAAGACCAATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAG 109841 Query 26248 TGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307 ||||| |||| || | |||||||| | ||||| | | | ||||| |||| | Sbjct 109840 GGTATCATAAATACCGTCGATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCAT 109781 Query 26308 TTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 || | || | || || | ||| || | || || | ||||||||| Sbjct 109780 CTGTGGCTGTGGCGTCCCCGCATTGAAAAGAGTGGGAGAAGCATGAGT 109733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253029264857075