Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3190 95.1 1e-14 >seq3190 Length=111093 Score = 95.1 bits (104), Expect = 1e-14 Identities = 272/415 (66%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 138170 GAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACA 138229 |||||| || || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 94656 GAGATGCTTGGCAACACCAATGGGCCCAACTCCAGGTCCACCGCCTCCGTGAGGAATGCA 94597 Query 138230 GAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAG 138289 || || || || | ||| || || || || || || ||| |||| || || Sbjct 94596 AAAGGTTTTGTGAAGATTAAGGTGGCAGACGTCAGCGCCAATCTCACCAGGAGAGCAAAG 94537 Query 138290 ACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAAC 138349 || | || ||||| | || || || || | ||| |||||||| |||| || || || Sbjct 94536 CCCAATTTGAGCATTCATGTTAGCGCCGTCCATATACACCTGACCGCCATGTTCGTGGAC 94477 Query 138350 GATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAAT 138409 || | || | | | ||||| | | |||||| ||||| ||| || |||||||| Sbjct 94476 AATGCTGCAAACTTCTTTGATGCTGGGTTCAAAAACACCGAAAGTGCTGGGGTATGTAAT 94417 Query 138410 CATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTC-TAGATCTTTGATGT 138468 ||| || || || || | | | | | | || | ||| || || | | Sbjct 94416 CATGATTGCTGCCAGCTCCTCTTTGTGC-TTCTCGCACTTAGCTCGGAGGTCCGCAACAT 94358 Query 138469 CTATGTTGCC---ATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTG 138525 | | ||| || | | ||| ||||| || ||||||||||| |||||||| | | Sbjct 94357 CGAGGTTTCCGGTAGCGGTATCGCACTTTACGGGGACAACTTTCATCCCTGCCATTGCAG 94298 Query 138526 CACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTT 138580 ||||||| || || || ||||| || || | || |||||||| | || ||||| Sbjct 94297 CACTAGCCGGGTTGGTACCATGAGCAGAAACAGGGATCAGACAGATGTTCCTTTT 94243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578973206332120