Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2399 138 1e-27 seq2322 84.2 3e-11 >seq2399 Length=446898 Score = 138 bits (152), Expect = 1e-27 Identities = 345/517 (67%), Gaps = 8/517 (2%) Strand=Plus/Minus Query 65004 AACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGT 65062 ||| || || || ||| |||||||| | ||||| || |||| | | || ||| Sbjct 271737 AACAGTTCCTTGCATTCGTAAGAAGGCTGACTGGGCCATTCGATGGATCCAAGACCAAGA 271678 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 || | | ||||| |||| || |||| |||||| || |||||||| |||||| | Sbjct 271677 ATC-CACTTTCGCTCAGCGGCTGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCAGTG 271619 Query 65123 GGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 | || ||| | |||| ||||| |||||||| ||||| ||||| ||||| ||||| Sbjct 271618 GCTCGTTCGCTTCCATTTTCTGGTTAAAGAAGCGTGGTCTTATGCCTGGCCTTACCTTCT 271559 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCA 65242 | |||||||| || || || || |||||||||||| || |||||| ||||| Sbjct 271558 CGAATGAACTGATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTTT 271499 Query 65243 AGACTTTGCGTAATAGACCCACTACCG-AAACTATCCACGCCATCGTGAAAGAGGCGGTT 65301 | | ||| | | |||| ||| | |||| |||||| | | ||||| ||| Sbjct 271498 CTCATCTTCGTCACCG-CCCAGGCCCGCCGGCCGTCCAGGCCATCATCACCGAGGCAGTT 271440 Query 65302 GAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCT 65361 ||||| ||||||| ||| | ||| || || || || || | || ||||| ||| Sbjct 271439 GAGATCGAGAAAGAATTCTTGACGGATGCCCTACCTTGCGCCCTACTTGGAATGAATTCT 271380 Query 65362 GAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTG 65421 || |||| | |||||||||||| || | || | || || || ||| Sbjct 271379 AAGCTCATGTGCCAGTACATTGAGTTCGTTGCTGACAGACTACTTGTGGCCCTT--GGTA 271322 Query 65422 CCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 || | ||| ||||| | || ||||| ||||| ||||| |||||| | | | Sbjct 271321 ACAAGAAATTTTACAACGCCACCAACCCATTCGACTTCATGGACAACATTTCGTTGGCCG 271262 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||| |||||||| |||||||| ||||| || || Sbjct 271261 GTAAGACGAACTTCTTCGAGAAGCGTGTTGGTGATTA 271225 >seq2322 Length=302684 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 ||||||||| || || || || || | | |||| |||||||| || ||||| | Sbjct 271949 TGGTGCCAAAATTCCTCGTGGTGCGATATTGTCGGGACCTCCAGGTACCGGTAAGACATT 272008 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || || ||||| || ||||||||| || || ||| | ||||| || || | | Sbjct 272009 GCTAGCAAAAGCCACGGCCGGTGAATCAGGCGTTCCTTTC-TACAGTG-TCAGCGGTTCG 272066 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || ||||| |||||||||||||| || | | ||||| |||||||||| || | Sbjct 272067 GAATTCGTGGAAATGTTTGTTGGTGTCGGCCCATCTCGCGTTCGTGATCTCTTTGCAACC 272126 Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || || ||||| || || ||| ||||||| || || || || || Sbjct 272127 GCGCGAAAAAATACCCCTTGCATTATCTTCATCGACGAAATCGACGC 272173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596543641765280