Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_020856.2 Length=40931 Score E Sequences producing significant alignments: (Bits) Value seq159 170 5e-38 >seq159 Length=45922 Score = 170 bits (188), Expect = 5e-38 Identities = 499/746 (67%), Gaps = 36/746 (5%) Strand=Plus/Plus Query 36889 GAACTGGCGAGACAACCCGAAGTTTCCCGACGTGCTGGAGGCTGAGCGCCTGAACGACTT 36948 ||||||||| || || ||| ||| || || ||| ||| ||||| ||| || | Sbjct 17663 GAACTGGCGGGATAATCCGTGGTTCACCAGCGAGCTTGAGCAGGAGCGTCTGGACACGCT 17722 Query 36949 CACGCGCCGGTCCGACCATTATGAACACATCTGGGAAGGCGGGTTCGTAACCGTTGTCGA 37008 || | || |||| |||| | |||||||||||||| | || ||| | ||||| || Sbjct 17723 CAGGATGCGACCCGATGATTACGGGCACATCTGGGAAGGTGAGTACGTCTCGGTTGTTGA 17782 Query 37009 GGGCGCATATTACGCCAAGGCAATCACGGTAG-CGCGGTCTGAGAACAGAATAGGCCACG 37067 ||||||||||||||| | || | || || || | || | | || ||| | | Sbjct 17783 CGGCGCATATTACGCCC-GTCAGTTGCGAGAGGCGAAGGAACAGGGCCGCATCGGCAAGG 17841 Query 37068 TCGCTGCCGATCCTTTGATGACCATTCGTGCGGTCTGGGACATTGGCGGCACGGG-GCAG 37126 | || || || || ||||||| ||||| | || |||||| ||||| || || || Sbjct 17842 TTGCGGCTGACCCGCTGATGACAATTCGCTTGTTCGCGGACATCGGCGGGACCGGCGCCC 17901 Query 37127 AAGTCAGACGCAACCGCAATCTGGATTGTCCAGTACGTCGGACGCGAAATTCGCCTGCTG 37186 | | ||||| | | || ||| | |||| | |||| |||||||||||| |||| Sbjct 17902 GCG-CGGACGCGTTCACGATGTGGGCGGCGCAGTTCATCGGCCGCGAAATTCGCGTGCTC 17960 Query 37187 AACTACTACGAGGCGCAGGGGCAACCTCTGGCGGCGCATATCGAGTGGCTGCGGGCAAAC 37246 | || ||||| ||| ||||| |||| ||||| || |||| |||| | Sbjct 17961 GATTATTACGAAGCGGTTGGGCAGGACTTGGCCACGCATCTCACGTGGATGCGATCGCGG 18020 Query 37247 GG--ATACG--GGGC--GGCGC---TCTGCGTATTGCCCCACGATGGCAGCACTAACGAC 37297 || ||||| || | ||||| |||| || || ||||||||| || | ||| Sbjct 18021 GGTTATACGCCGGACAAGGCGCAGATCTGGCTA---CCTCACGATGGCGCAACGCAGGAC 18077 Query 37298 AAGGTGCATGACGTATCATTCGAGAGCGCACTACGGGCCGCAGGGT--TCGAAGTGCAGG 37355 ||||| | | || || | ||||||||| || || || || | ||| || | Sbjct 18078 AAGGTTTACGCTGTCTCGTACGAGAGCGCGCTGAGGCAGGCCGGCTATTCG--GTCACCG 18135 Query 37356 TCGTTAAGAACCAAGGGGCGGGTGCGGCAATGCAGCGCGTAGAGGC--GGC-ACGGCGTC 37412 | || |||||| || ||| ||||| | | ||| | |||| ||| ||||| || Sbjct 18136 TTATTCCGAACCAGGGCAAGGGCGCGGCGAAGGCTCGCATCGAGGAAGGGCGACGGC-TC 18194 Query 37413 TATTCCCCAGCATGTGGTTCAACCAAGCGACGACAGAGGCCGGCTTGGACGCGATCGGCT 37472 | |||| ||| |||||||||||| ||| || || ||| ||| | || || | || | Sbjct 18195 T-TTCCGCAG-ATGTGGTTCAACGAAGACACCACGCAGGGCGGTCTTGATGCCTTGGGTT 18252 Query 37473 GGTATCACGAAAAGCGC---GACGAAGAACGCGGCATCGGCTTAGGGCCAAGCCATGACT 37529 ||||||||||| ||| ||||| || |||||||| || ||||||| || || | Sbjct 18253 GGTATCACGAA---CGCAAAGACGACGATCGCGGCATTGGACTAGGGCCTGAGCACGATT 18309 Query 37530 GGTCAAGTCACGGCGCTGACGCCTTCGGGCTGGTGGCTGTTGCCTATGAGCAGCCGCAAG 37589 || | |||||||| ||||||||||||||| || ||||||||| ||| ||| | | Sbjct 18310 GGGCGTCACACGGCGCCGACGCCTTCGGGCTGATGTGTGTTGCCTACGAGGCGCCCC--G 18367 Query 37590 GCAAGTCGCAAGAGACGGCATTTGTC 37615 ||||| ||| ||| || ||||||| Sbjct 18368 GCAAG-CGC-AGAAACTCGATTTGTC 18391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130852190755746