Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_020858.2 Length=40929 Score E Sequences producing significant alignments: (Bits) Value seq159 170 5e-38 >seq159 Length=45922 Score = 170 bits (188), Expect = 5e-38 Identities = 499/746 (67%), Gaps = 36/746 (5%) Strand=Plus/Minus Query 9752 GACAAATGCCGTCTCTTGCGACTTGCCTTGCGGCTGCTCATAGGCAACAGCCACCAGCCC 9811 ||||||| || ||| ||| |||||| | ||| ||| ||||||||| || |||||| Sbjct 18391 GACAAATCGAGTTTCT-GCG-CTTGCC--GGGGCGCCTCGTAGGCAACACACATCAGCCC 18336 Query 9812 GAAGGCGTCAGCGCCGTGACTTGACCAGTCATGGCTTGGCCCTAAGCCGATGCCGCGTTC 9871 ||||||||| |||||||| | ||| || || ||||||| || |||||||| || Sbjct 18335 GAAGGCGTCGGCGCCGTGTGACGCCCAATCGTGCTCAGGCCCTAGTCCAATGCCGCGATC 18276 Query 9872 TTCGTC---GCGCTTTTCGTGATACCAGCCGATCGCGTCCAAGCCGGCCTCTGTCGTCGC 9928 ||||| ||| |||||||||||| || | || || | ||| ||| || || | Sbjct 18275 GTCGTCTTTGCG---TTCGTGATACCAACCCAAGGCATCAAGACCGCCCTGCGTGGTGTC 18219 Query 9929 TTGGTTGAACCACATGCTGGGGAATAGACGCCGT-GCC--GCCTCTACGCGCTGCATTGC 9985 || |||||||||||| ||| |||| ||| ||||| ||| |||| | ||| | | || Sbjct 18218 TTCGTTGAACCACAT-CTGCGGAA-AGA-GCCGTCGCCCTTCCTCGATGCGAGCCTTCGC 18162 Query 9986 CGCACCCGCCCCTTGGTTCTTAACGACCTGCACTTCGA--ACCCTGCGGCCCGTAGTGCG 10043 ||| ||| || |||||| || || || ||| | || || || || ||| Sbjct 18161 CGCGCCCTTGCCCTGGTTCGGAATAACGGTGAC--CGAATAGCCGGCCTGCCTCAGCGCG 18104 Query 10044 CTCTCGAATGATACGTCATGCACCTTGTCGTTAGTGCTGCCATCGTGGGGCAATACGCAG 10103 |||||| | || || | | |||||||| | || ||||||||| || || ||| Sbjct 18103 CTCTCGTACGAGACAGCGTAAACCTTGTCCTGCGTTGCGCCATCGTGAGG---TAGCCAG 18047 Query 10104 A---GCGCC--GCCC--CGTAT--CCGTTTGCCCGCAGCCACTCGATATGCGCCGCCAGA 10154 | ||||| | || ||||| || | |||| |||| || ||||| |||| Sbjct 18046 ATCTGCGCCTTGTCCGGCGTATAACCCCGCGATCGCATCCACGTGAGATGCGTGGCCAAG 17987 Query 10155 GGTTGCCCCTGCGCCTCGTAGTAGTTCAGCAGGCGAATTTCGCGTCCGACGTACTGGACA 10214 ||||| ||| ||||| || | |||| |||||||||||| |||| | |||| | Sbjct 17986 TCCTGCCCAACCGCTTCGTAATAATCGAGCACGCGAATTTCGCGGCCGATGAACTGCGCC 17927 Query 10215 ATCCAGATTGCGGTTGCGTCTGACTTCTGC-CCCGTGCCGCCAATGTCCCAGACCGCACG 10273 ||| || | | ||||| | | || || || ||||| |||||| || | || Sbjct 17926 GCCCACATCGTGAACGCGTCCG-CGCGGGCGCCGGTCCCGCCGATGTCCGCGAACAAGCG 17868 Query 10274 AATGGTCATCAAAGGATCGGCAGCGACGTGGCCTATTCTGTTCTCAGACCGCG-CTACCG 10332 ||| ||||||| || || || || || | ||| || | | || | || || || Sbjct 17867 AATTGTCATCAGCGGGTCAGCCGCAACCTTGCCGATGCGGCCCTGTTCCTTCGCCTCTCG 17808 Query 10333 TGATTGCCTTGGCGTAATATGCGCCCTCGACAACGGTTACGAACCCGCCTTCCCAGATGT 10392 | || | ||||||||||||||| || ||||| | ||| || | ||||||||||||| Sbjct 17807 CAACTGAC-GGGCGTAATATGCGCCGTCAACAACCGAGACGTACTCACCTTCCCAGATGT 17749 Query 10393 GTTCATAATGGTCGGACCGGCGCGTGAAGTCGTTCAGGCGCTCAGCCTCCAGCACGTCGG 10452 | | |||| |||| || | ||| || ||| ||||| ||| ||| || || Sbjct 17748 GCCCGTAATCATCGGGTCGCATCCTGAGCGTGTCCAGACGCTCCTGCTCAAGCTCGCTGG 17689 Query 10453 GAAACTTCGGGTTGTCTCGCCAGTTC 10478 ||| ||| || || ||||||||| Sbjct 17688 TGAACCACGGATTATCCCGCCAGTTC 17663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130845791020302