Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3158 125 1e-23 >seq3158 Length=82937 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| || | || || |||| || | ||| || ||||||||||| | || | Sbjct 52359 ATGTTGTAATCGGAAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGC 52300 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| ||||| || |||||||||||||| || || | || || ||| || | | Sbjct 52299 TGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACGTTATCAATGGTA 52240 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||||||||| ||||||| ||||||||||| || || | || || | || |||||| Sbjct 52239 TCTGACGATTCGACTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGC 52180 Query 192535 AT 192536 || Sbjct 52179 AT 52178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984436091884350