Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_021301.1 Length=56279 Score E Sequences producing significant alignments: (Bits) Value seq1231 425 2e-114 >seq1231 Length=29534 Score = 425 bits (470), Expect = 2e-114 Identities = 947/1394 (68%), Gaps = 102/1394 (7%) Strand=Plus/Minus Query 42907 CCGGTGATGCTCGGACAAGGCATGAACCTTCAGCAGGCACA--CACCTG--CGTCTACAT 42962 ||||||||||| || |||| ||||| |||| | ||| |||| ||| | | | Sbjct 4092 CCGGTGATGCTGGGCAGCGGCACCAACCTGCAGC-GCCACTGCCACCGCGCCGTGTTCGT 4034 Query 42963 CGGCATTACCCACAAGTTCAACGACCTCATCCAGAGCG-TGCACCGGATTCAACGGTTCG 43021 |||| | | ||||||||||||| |||||||| ||| | |||||| | || || ||| Sbjct 4033 CGGCGTAGGCTTCAAGTTCAACGACTTCATCCAG-GCGATCCACCGGCTCCAGCGCTTCC 3975 Query 43022 GCCAAACCCACCCTTGCACCGCCCATCTCATCCACTCCGAAACCGAACGGGAAGTGGTGC 43081 || | ||||| | | | | |||||||| ||||||| || ||||| || |||| Sbjct 3974 AGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGC 3915 Query 43082 GGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCA 43141 | | | | | | ||| ||||| | ||| ||| ||| | ||| |||| |||| Sbjct 3914 GCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCA 3855 Query 43142 TTCACGAGTACGGGCTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGG 43200 | | ||| || || || | | || | | |||| ||||| | ||||| ||||| Sbjct 3854 TCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGC 3796 Query 43201 TGCGAACGCATCGAAGCCTCTGGTGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGCCC 43260 ||| || || | | |||| || |||||| | | || ||||||||||||| Sbjct 3795 GTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGAT 3736 Query 43261 GAAACCGAGTCCATGGGCGACAGCTCGGTGGACCTGATTGTCACCAGCATTCCGTTCTCC 43320 || | | ||| ||| | ||||| |||||||| |||||| ||| |||||| | Sbjct 3735 GAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGC 3676 Query 43321 AACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCAT 43380 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| Sbjct 3675 AACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCAT 3616 Query 43381 TTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGT 43440 |||| ||||||||||| | || || ||| | ||||| || || ||||||||||| Sbjct 3615 TTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGG 3556 Query 43441 ATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGC 43497 || |||||| ||||| |||||||| ||| ||||||| || ||||||| || Sbjct 3555 CTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGT 3499 Query 43498 GTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGC 43554 ||||| || || |||||||||||| || ||| ||| ||| |||||| Sbjct 3498 GTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGC 3442 Query 43555 TTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACG 43614 ||| | | | | |||||||||||||| |||||||| || ||||| || ||||||||||| Sbjct 3441 TTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACC 3382 Query 43615 TACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCC 43671 ||||| ||| | || | | | ||| || |||| ||| |||||||| |||| | Sbjct 3381 TACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGC 3325 Query 43672 CCGGAATACGTTCTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGAC 43731 || |||||||| |||||| | | ||| ||||||| ||| | || || || |||||| Sbjct 3324 CCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGAC 3265 Query 43732 ACACCCGTCACCAAATCCAAGGACGA---ATACACCCGTGCCCGTTGGCAGGTGGACGCG 43788 || || |||||||| || | ||| |||| || || || |||||||| ||||| Sbjct 3264 ACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCC 3208 Query 43789 CACGCGTTCTGGCGATCGAGCGGAAACAGGACACTGACAGCCGACGAGCT------CGCC 43842 ||||| |||||||| || ||||| | | | || || | |||||| | | Sbjct 3207 CACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGAGGTC 3148 Query 43843 G-----CGCTGCCACCAGA--CCAGTTGGCCTCACTGTTCACCAAGCACAGCC-TGAAG- 43893 | |||| || ||| | | ||||| | || | |||| || |||| Sbjct 3147 GAAGACCGCTTCCTCCATATGGCGACTGGCCAAA----TCGCGAAGCGGTTCCGCGAAGA 3092 Query 43894 GACG----------TCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTCGAA 43941 |||| || || | || || | || ||| |||||| ||| || | || | Sbjct 3091 GACGCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGCGGA 3032 Query 43942 --GGTCG--------CGGT----GC--CCTGCCTGCCACGTTCATGGCCATCGC-CCCGG 43984 || || |||| || |||||| ||| |||||||| ||||| ||||| Sbjct 3031 TCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCCGG 2972 Query 43985 GATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACGGG 44040 | | |||| || |||||||| ||||| | |||||| || | ||||| Sbjct 2971 CA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACGGC 2917 Query 44041 GAGCAGAAACGCCGCAA---CGTCCAAATGCACGTGTGCCCCCTGCAGTTCGACATCGTT 44097 |||||| |||||| || | | | |||||| |||||||| |||||||||||||| Sbjct 2916 GAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCGTC 2860 Query 44098 GACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGG 44157 |||||||||||| || | ||| | | |||||| |||||||||| |||||| |||| Sbjct 2859 GACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGC 2800 Query 44158 CTGGGCACCGTGCCGTTGCGGGCTCTGAAACTT---GGTCGCCGCGGCCGTGGTGTCGAG 44214 || |||||||||||| |||| || || ||| |||||||||||| || ||| Sbjct 2799 CTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAA 2743 Query 44215 CTGAATCCCGGCTA 44228 || || |||| ||| Sbjct 2742 CTCAACCCCGACTA 2729 Score = 233 bits (258), Expect = 7e-57 Identities = 278/374 (74%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 42199 TTCACGGCCGTCTCACTCGATGAGGCATCCGTGCTGCGCTCGTTCGGGTCGAAGACCTAC 42258 ||||| |||||| || || ||||| | | || |||||||||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 42259 CAGTCGTTCCTGGAGCTGTTCGACGGCGTGCCCTATCGGTTTGTCGCCACCGCGACGCCG 42318 ||| |||||||| ||| ||||| | ||||| || || |||||||| ||||| || || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 42319 TCTCCGAATCGCTTCAAGGAGCTGATCCACTACGCGGGCTATCTCGGTGTGATGGACACC 42378 || || || |||| ||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 42379 GGCGCAGCGTTGACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTC 42438 ||| |||| | || || | |||||||| || | ||||||| | | ||||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 42439 TATCCCCACAAGGAGCGTGAGTTCTTTCTGTGGCTCAACACCTGGGCCGCGTTCGTGCAA 42498 || || |||||||| | ||||||| |||||||| || | |||||||| ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 42499 TCGCCGGCAGACCTCGG--TCA-CGACGCCACCGGATACGACCTGCCGCCCCTGGAGGTG 42555 ||| |||||||| ||| |||| ||| ||||| ||||| | || ||| Sbjct 5473 CGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTG 5417 Query 42556 GTCTGGCATGAGGT 42569 |||||| ||||| Sbjct 5416 CGCTGGCACGAGGT 5403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179963760553002