Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq204 181 3e-41 seq2984 98.7 3e-16 >seq204 Length=38477 Score = 181 bits (200), Expect = 3e-41 Identities = 240/331 (73%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 40707 CCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATC 40766 ||| | ||||||||||| ||| ||| |||||||| | ||||||| ||| Sbjct 25417 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 25358 Query 40767 ACCTCGCCACGAC--GCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCT 40824 ||| | | || ||| | || |||||||||||||| || ||||| |||||||||| Sbjct 25357 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 25300 Query 40825 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCC 40884 | ||||||||||| |||||||| | || || || || || ||||||||||||||| Sbjct 25299 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 25240 Query 40885 CGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGC 40944 ||| ||||| |||||||| ||||| | || || || || ||||||||| | || Sbjct 25239 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 25180 Query 40945 CGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCA 41004 |||| | ||| |||||| ||||||||| | |||| ||||||||| ||||| |||| Sbjct 25179 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 25120 Query 41005 TCTGGATGATCATGTCGATCTCGTACTGGAG 41035 ||| | ||| | |||||||| ||| ||| Sbjct 25119 TCTTCAGGATGGTCCCGATCTCGAACTCGAG 25089 Score = 120 bits (132), Expect = 1e-22 Identities = 211/304 (69%), Gaps = 14/304 (5%) Strand=Plus/Minus Query 39649 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39708 ||||||| | ||||||| ||||||||| | ||| ||||||||| || |||||| | Sbjct 26439 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 26380 Query 39709 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACA------ 39762 | | ||||| |||||||||| ||||||| ||||| ||| || ||| | | Sbjct 26379 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 26320 Query 39763 CTGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39821 | |||| || | ||| | | | |||| ||||| | ||| |||| || | Sbjct 26319 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 26267 Query 39822 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCC 39881 | || ||||| |||||| |||||||||||||||||||||||| |||||||| || Sbjct 26266 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 26207 Query 39882 TGACCGAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTCCTGGTAGATG 39941 || || ||||| ||| ||| || ||| || || | ||| || |||||||||| Sbjct 26206 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 26147 Query 39942 ATGA 39945 |||| Sbjct 26146 ATGA 26143 >seq2984 Length=16327 Score = 98.7 bits (108), Expect = 3e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 40662 AGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGATC 40721 ||||||||| | | ||||||| | | ||||||||| | | ||| | || |||| Sbjct 10026 AGCACGCGGCCGGTATCCTTCAGCACCGCGCGCGCCTTCAGCTTACCGAAGGTGATGATC 9967 Query 40722 TGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGC 40781 || ||||||| | | ||| || ||| ||||| ||||||||||||| || ||| Sbjct 9966 TGGGCGACCTGATTGCGCCCATATTTCTCCTGCACGTAGCGGATCACCTCGCCGCGCCGC 9907 Query 40782 CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGC 40841 || ||| ||||| |||| |||||||| || ||||| || ||||| ||||| || Sbjct 9906 GTTTCGCAGAAATCGATATCGAAGTCGGGCATAGAGACGCGTTCCGGGTTGAGGAAGCGT 9847 Query 40842 TCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40883 ||||| | || || | || || ||||| ||||||||| Sbjct 9846 TCGAACAGCAGGCCCAATTGCAAGGGATCGAGATCGGTGATC 9805 Score = 80.6 bits (88), Expect = 9e-11 Identities = 98/131 (75%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 40917 GAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCG 40976 ||||| ||||| || || ||| | | | | | ||| ||||| |||||||||| ||| Sbjct 9594 GAGCCACGCCCCGGCCCCACCGGTATGTCCTGCGACTTAGCCCATTGGATGAAGTCGGCG 9535 Query 40977 ACGACGAGGAAGTACGACGGGAA-GCCCATCTGGATGATCATGTCGATCTCGTACTGGAG 41035 |||| ||||| || | |||||| ||||||||||||||| | || | |||| | | ||| Sbjct 9534 ACGATCAGGAAATA-GCCGGGAAAGCCCATCTGGATGATGACATCCAGCTCGAAATCGAG 9476 Query 41036 CTGCTTGCCGT 41046 | |||||| || Sbjct 9475 CCGCTTGCGGT 9465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164837985831108