Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq3355 145 1e-29 seq372 125 1e-23 >seq3355 Length=30814 Score = 145 bits (160), Expect = 1e-29 Identities = 206/290 (71%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 98901 CAGTATCAAGATTTAATGGCTGAAGTCTTTGCGAAAGGTACGCCGAAGAAAGACCGTACC 98960 ||||| |||| || ||| | |||| || | || ||||| |||| ||||| ||| Sbjct 9202 CAGTACGAAGACTTCATGCGCCATGTCTACACGCATGGCACGCCCAAGACCGACCGCACC 9143 Query 98961 GGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAAGAAGGTTTC 99020 ||||| ||||||| | |||||| |||||||||| ||| || || | || || ||| Sbjct 9142 GGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTC 9083 Query 99021 CCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTGCTGTGGTTC 99080 |||||||| || |||||| ||||||| || || ||||| || |||||||||||| Sbjct 9082 CCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTC 9023 Query 99081 CTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAA 99140 ||| | ||| | | | | | | | ||| || || || ||||| ||||||||| Sbjct 9022 CTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAA 8963 Query 99141 TGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 |||||| | | | |||||||| || ||||| ||||| ||||||||| Sbjct 8962 TGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 8913 Score = 114 bits (126), Expect = 2e-20 Identities = 224/326 (69%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 99585 AAGTTGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAAC 99644 ||| |||| || ||||| || ||||| ||||||||| | ||| |||| |||||||| ||| Sbjct 8737 AAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAAC 8678 Query 99645 ATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGG 99703 ||||| || || ||||| | |||||| | || |||||| |||| ||||||| || Sbjct 8677 ATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACC-TGGCGGTCGG 8619 Query 99704 CGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACG 99763 ||| ||| ||||||||||||| || || | || ||||| | || |||| | Sbjct 8618 CGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGG-TGG 8560 Query 99764 TACT-CAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCCGG 99822 ||| ||| | || || | | | | || |||| ||||| || ||||||| Sbjct 8559 AACTGCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGG 8500 Query 99823 ACTCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCCGG 99882 || ||||||||||| || ||| || || || || | |||| | | || |||| Sbjct 8499 CGTCGATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGG 8440 Query 99883 CTATTAAAGCACCGGTGGCGATATGA 99908 | || || || || |||||| | ||| Sbjct 8439 CGATCAAGGCGCCCGTGGCGGTCTGA 8414 >seq372 Length=11520 Score = 125 bits (138), Expect = 1e-23 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011 ||||| ||||| || |||||||| ||||||||||||||||||| ||| | || Sbjct 9524 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 9583 Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTG 99071 || || |||||| || | || |||||| ||||||||||| || ||| || || Sbjct 9584 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 9643 Query 99072 CTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATT 99131 |||||||||||| ||||||||||| | | | ||| | ||| || | ||| Sbjct 9644 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 9703 Query 99132 TGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 ||||||||||||||||| | || || ||||| ||||| || || ||||| ||||| Sbjct 9704 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 9762 Score = 95.1 bits (104), Expect = 2e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 99597 CAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCGTCGTAT 99656 || ||||| ||||| |||||| | ||| | || |||||||| |||||||| ||| Sbjct 9950 CAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTAT 10009 Query 99657 GCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGGCGATTTCGTCTG 99715 || || || | |||||| | || ||||| ||| ||| | |||||| ||| |||| Sbjct 10010 GCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGC-TGGAGCCGGGCGAGTTCATCTG 10068 Query 99716 GACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGTACTCAGTTAGG 99775 ||||||||| ||| || || ||||| ||||| || || ||||| || ||| | || Sbjct 10069 GACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCAGCTTGG 10128 Query 99776 TCGTACTCCGCGTGCGTTGCC 99796 ||||| ||| | || |||| Sbjct 10129 CCGTACCCCGGGACCGCTGCC 10149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716605617341240