Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_021538.1 Length=59626 Score E Sequences producing significant alignments: (Bits) Value seq1231 352 1e-92 >seq1231 Length=29534 Score = 352 bits (390), Expect = 1e-92 Identities = 643/923 (70%), Gaps = 29/923 (3%) Strand=Plus/Minus Query 46188 AACCAGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 46243 |||| |||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 46244 ATCGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTT 46302 ||||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 46303 CGGCCAAACCCATCCCTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGT 46362 | || | || || | | | | | | |||||| ||||||| |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 46363 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACAT 46422 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 46423 CATTCATGAGTACGGACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCG 46481 ||| | || || || || | | || | || ||| | | |||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCG 3798 Query 46482 GATGTGAGCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTC 46541 | ||||| || | | || || || ||| | | || ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 46542 ACGAAACCAAGAGCATGGCAGACGATTCGGTGGATCTGATCGTCACCAGCATTCCGTTCT 46601 | || | | ||| || | ||||| || |||||||||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 46602 CCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACAACAACGAGC 46661 ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 46662 ACTTCTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCGCCGGGCC 46721 | |||| ||||||||| | || || ||| | ||||| || || ||||||||| Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 46722 GTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCG 46778 | | |||||| |||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 46779 GCGTGCCCACGGTGTCACCCTTCCACGCCGAGGCGATCTTCCAC-GGACGCAAACACGGC 46837 | ||||| || || || ||||||||| || ||| ||| | || |||||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-GCCACGGC 3442 Query 46838 TTCGACTACCTCGGCATGATCACCGTCATCACCGATGTGGTCCGGGAAAACAACCAGACG 46897 ||| | | | | ||||||||||||||| ||||||| || || || || ||||||||||| Sbjct 3441 TTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACC 3382 Query 46898 TACCGGCTGGGCTGGT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGCGTCGGCTCC 46954 ||||| ||| | || ||| | ||| || |||| ||| ||||||||| |||| | Sbjct 3381 TACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGC 3325 Query 46955 CCGGAATACATTCTGTTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGAC 47014 || |||||| | ||| || | | ||| ||||||| ||| | || || || |||||| Sbjct 3324 CCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGAC 3265 Query 47015 ACACCCGTCACCAAATCCAAGGACGA---CTACACCCGTGCCCGTTGGCAGGTGGACGCG 47071 || || |||||||| || | ||| ||||| || || || |||||||| ||||| Sbjct 3264 ACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCC 3208 Query 47072 CACGCATTCTGGCGCTCGAGCGG 47094 ||||| ||||||||||| ||||| Sbjct 3207 CACGCCTTCTGGCGCTCCAGCGG 3185 Score = 237 bits (262), Expect = 6e-58 Identities = 281/375 (75%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 45482 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACGTAC 45541 ||||| |||||| || || ||||| ||| | | || || |||||||| ||||| | | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 45542 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCGACGGCCACGCCG 45601 ||| ||||||| ||| ||||| | |||||| ||||| | |||||||| ||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 45602 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGCTATCTCGGGGTGATGGACACC 45661 || || ||||| |||||||||||||| || ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 45662 GGGGCAGCGCTCACGCGTTGGTTCCAGCGGGACT-CGACGAAGGCGAACAACCTCACCCT 45720 || ||||||||| || | |||||||| || ||| ||||||| | | |||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCT 5535 Query 45721 CTACCCACACAAGGAGCGCGAGTTCTGGCTGTGGCTGAACACGTGGGCTGCGTTCGTGCA 45780 |||||| |||||||| | |||||||||||||||||||| | ||||| | ||| |||| Sbjct 5534 CTACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCA 5475 Query 45781 ATCACCGGCCGACCTAGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGT 45837 ||| |||||| || ||| |||| |||||| || ||||| |||| || Sbjct 5474 GCGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 45838 GTTGTGGCATGAGGT 45852 | ||||| ||||| Sbjct 5417 GCGCTGGCACGAGGT 5403 Score = 105 bits (116), Expect = 3e-18 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Minus Query 48349 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 48408 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 2884 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 2825 Query 48409 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 48466 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 2824 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 2768 Query 48467 -GGTCGGCGCGGC 48478 ||||| |||||| Sbjct 2767 CGGTCGCCGCGGC 2755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190673717818536