Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq1231 378 2e-100 >seq1231 Length=29534 Score = 378 bits (418), Expect = 2e-100 Identities = 939/1396 (67%), Gaps = 102/1396 (7%) Strand=Plus/Minus Query 40618 AACCAGTGATGCTCGGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTAC 40673 |||| |||||||| |||||| |||| |||||||||| | |||| | |||| | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 40674 ATGGGCATCACGCA-CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTT 40732 | ||| | | || |||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 40733 CGGCCAAACCCATCCCTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGT 40792 | || | || || | | | | | |||||| |||| || |||||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 40793 GCGGGTCATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACAT 40852 ||| | | | | | ||| ||||| | ||| ||| ||| | ||| |||| || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 40853 CATTCATGAGTACGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCG 40911 ||| | || || || || | | || | | |||| ||||| | ||||| |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 40912 GATGTGAGCGCATCGAAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTC 40971 | ||||| || | | || || || ||| | | | ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 40972 ACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCT 41031 | || | | | ||| || | ||||| || ||||| ||||| ||| |||||| Sbjct 3737 ATGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCA 3678 Query 41032 CCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGC 41091 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 3677 GCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGC 3618 Query 41092 ATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCC 41151 |||||| ||||||||||| | || || ||| | ||||| || || |||||||||| Sbjct 3617 ATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCC 3558 Query 41152 GTATCTACGCCTGC---CACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCG 41208 | || |||||| ||||| |||||||| ||| ||||||| || ||||||| | Sbjct 3557 GGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGG 3501 Query 41209 GCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACG 41265 | ||||| || || |||||||||||| || ||| ||| ||| |||| Sbjct 3500 GTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACG 3444 Query 41266 GCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGA 41325 ||||| | | | | |||||||||||||| |||||||| || ||||| || |||||||||| Sbjct 3443 GCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGA 3384 Query 41326 CGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCT 41382 | ||||| ||| | || | | | ||| || |||| ||| |||||||| |||| Sbjct 3383 CCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 41383 CCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCG 41442 ||| |||||| | |||||| | | ||| ||||||| ||| | || || || |||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 41443 ACACACCCGTCACCAAATCCAAGGACGA---ATACACCCGTGCCCGATGGCAGGTGGACG 41499 |||| || |||||||| || | ||| |||| || || || |||||||| |||| Sbjct 3266 ACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACG 3210 Query 41500 CGCACGCGTTCTGGCGCTCGAGCGGCAACCGGTTACTGACCGCCGACGAGCT------CG 41553 | ||||| ||||||||||| |||||| | || || |||| |||||| | Sbjct 3209 CCCACGCCTTCTGGCGCTCCAGCGGCGAGCGCCCGCTCACCGTGCGCGAGCTATGGGAGG 3150 Query 41554 CCG--CACTGCCACCAGACCAGTTGGCCTCACTG-----TTCACCAAGCACAGCC-TGAA 41605 || || || || ||| |||| |||| || | |||| || ||| Sbjct 3149 TCGAAGACCGCTTCC--TCCATATGGC--GACTGGCCAAATCGCGAAGCGGTTCCGCGAA 3094 Query 41606 G-GACG----------TCTACGACTACCAGTCACACGTCCGCATCGGTGAG--CAACTCG 41652 | |||| || || | || || | || ||| |||||| ||| || | || Sbjct 3093 GAGACGCGCGACCTCATCCACAGCCACAAGGCGCATGTCGACATCGGCGAGGCCATCGCG 3034 Query 41653 AA--GGTCG--------CGGT----GC--CCTGCCTGCTACGTTCATGGCCATCGC-CCC 41695 | || || |||| || |||||| || |||||||| ||||| ||| Sbjct 3033 GATCGGCCGGCCGGCTCCGGTCTGGGCAGCCTGCCGCGCACCTTCATGGCGATCGCGCCC 2974 Query 41696 GGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGAACCGGATGATCACCTTGAACG 41751 || | | |||| || |||||||| ||||| | |||||| || | |||| Sbjct 2973 GGCA-----GCCACCATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACG 2919 Query 41752 GGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGTGCCCCCTGCAGTTCGACATCG 41808 | |||||| |||||| || | | | ||| || |||||||| ||||||||||||| Sbjct 2918 GCGAGCAG---GTCCGCAAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCG 2862 Query 41809 TTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCG 41868 | |||||||||||| || | ||| | | |||||| |||||||||| |||||| ||| Sbjct 2861 TCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCG 2802 Query 41869 GGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CGGTCGGCGCGGCCGTGGTGTCG 41925 | || |||||||||||| |||| || || || |||||| |||||| || || Sbjct 2801 GCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCGGTCGCCGCGGCGCCGGCAGCG 2745 Query 41926 AGCTGAATCCCGGCTA 41941 | || || |||| ||| Sbjct 2744 AACTCAACCCCGACTA 2729 Score = 226 bits (250), Expect = 1e-54 Identities = 278/376 (74%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 39912 TTCACGGCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTAC 39971 ||||| |||||| || || ||||| ||| | | || || |||||||| ||||||| | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 39972 CAGTCGTTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCG 40031 ||| ||||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 40032 TCACCGAACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACC 40091 || || ||||| |||||||||||||| || ||||| |||| ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 40092 GGCGCGGCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTC 40151 ||| || ||||| | | |||||||| ||||| |||||| | || |||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 40152 TACCCACATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA- 40210 ||||| || || || | || |||||||| ||||| |||| |||||||| ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 40211 ATCCCCAGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGT 40267 ||| ||| ||||| || | ||||| |||||| || ||||| || | || Sbjct 5473 CGCCCGAGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 40268 GCAGTGGCATGAGGTC 40283 || ||||| |||||| Sbjct 5417 GCGCTGGCACGAGGTC 5402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173676020479272