Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq3180 120 2e-22 seq2546 87.8 1e-12 >seq3180 Length=115279 Score = 120 bits (132), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 95173 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 95232 |||| ||||| ||||| |||| || || || || |||||||| |||||||||| || Sbjct 1239 TTGGCCTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGG 1180 Query 95233 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 95292 || || ||||| |||||||||||||| || | ||| | ||| | |||| || ||| Sbjct 1179 TGGATGCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGA--TC-TTC 1123 Query 95293 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGT 95344 ||| | ||||||| ||||| ||||||||||||| ||| |||||||||| Sbjct 1122 TTGCCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 1071 Score = 100 bits (110), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 95455 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATC 95514 ||||| |||||||| || ||||| ||||| || | ||| | | |||| |||| Sbjct 873 TCGGTCACCACCGGTGCCAGCAGGTGCGGGATGCCCTCGTAGACCGACATCTCCAGCATC 814 Query 95515 TTCGGGTCGATCATGATGAGCTTGAC-CCGATCAGGATT-GGCTCGGTAGAGCATGGAAA 95572 |||||||||||||| | || ||| || | | || ||| ||| |||| || | Sbjct 813 TTCGGGTCGATCATCAGCAGGCGGACATCG--CGTGCTTCGGCCTTGTAAAGCAGCGACA 756 Query 95573 CCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGT 95632 | ||||| ||||||| | |||||||| |||||||||| ||| |||||||||| || Sbjct 755 GGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCCGGCCACCAGCACGT 696 Query 95633 GGGGCATTTTGGCCAGGT 95650 | ||||| |||||||||| Sbjct 695 GCGGCATCTTGGCCAGGT 678 >seq2546 Length=2143 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 95166 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95225 ||||| ||| | ||||| | ||| |||| || || || ||||| ||||||||||||| Sbjct 803 CGGCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCAT 744 Query 95226 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95285 || ||| || || || || ||||||||||| || |||| ||| || | || || Sbjct 743 GATGAGGTGGATGCCCGCCGCGCGCGCCTTTTGCGCGAGGCGCTGGATCAGGAATTCCAC 684 Query 95286 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGAT 95342 ||| |||| || |||||| ||||| || || |||||||| | || ||||| Sbjct 683 TTC---CTTGCCCGCGGTCATCATCAGGTCCGCAAGCTCGTCGACGATCACGACGAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346410903002178