Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq2277 230 4e-55
seq3075 147 4e-30
>seq2277
Length=5225
Score = 230 bits (254), Expect = 4e-55
Identities = 335/468 (72%), Gaps = 4/468 (1%)
Strand=Plus/Minus
Query 35465 CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCACTCTC 35524
|||||||||||| || |||||||| |||||||| | | |||||| ||||||| |||||
Sbjct 3598 CTGGCCCTGGTACTTGCCGCCGCGGTCCTTGTAGCTGGTCTCGCAGACCTCGTCGCTCTC 3539
Query 35525 GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGT 35584
||| ||||| | ||| || |||||| ||| || | || || || || ||
Sbjct 3538 GAAGAACAGAACCTGGGCGCAGCCTTCGCCCGCATAGATCTTGGCGGGAAGCGGCGTCGT 3479
Query 35585 GTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGAC 35644
|||| ||||||||| ||||| | |||||||| || || || | |||||| ||||||||
Sbjct 3478 GTTGGAGAACTCCAGCGTCACGTAGCCTTCCCATTCCGGCTCGAACGGCGTGACGTTGAC 3419
Query 35645 GATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGG 35704
|||||| || ||||| || || |||||||| |||| || | || |||||||||||
Sbjct 3418 GATGATCCCGCAGCGGGCATACGTGCTCTTGCCCAGGCAGATGGTCAGCACGTTGCGCGG 3359
Query 35705 AATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCT 35764
||||||||||| || | |||||| ||||| ||||||||||| ||||| || | | |
Sbjct 3358 GATGCGGAAGTACTCCAGCGTGCGGGCCAGCGCGAAGCTGTTGGGCGGGATGATGCAGAC 3299
Query 35765 GTCAGCCT-TAACCGGCTGCAGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGC 35823
||| | | || | | | || ||| ||||| ||||| || || ||||| | ||
Sbjct 3298 GTCGTCGTGGAAGTCGACG-AAGCTCTTCTCGTCGAAATTCTTGGGGTCCACCACCGTGC 3240
Query 35824 TGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCACGTCATAACCATACGAC 35882
||| ||| |||||||| || | | || ||| ||| || | ||| || ||||| |
Sbjct 3239 TGTGGATATTGGTGAACACCTTGAATTCGGGGGC-GCAGCGGATGTCGTAGCCATAGCTC 3181
Query 35883 GAGTTGCCGTACGAGATAACGTGCTGACCGTCGATGTTGCGCACTTGC 35930
||| ||||| | ||| || || | || |||| | |||||| |||
Sbjct 3180 GAGGTGCCGAAGCTGATCACCCGCCGGCCATCGACCTCGCGCACCTGC 3133
>seq3075
Length=32470
Score = 147 bits (162), Expect = 4e-30
Identities = 215/304 (71%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGT 35511
|||| || || ||| ||| ||||| ||| ||||||| ||| ||| |||||
Sbjct 13432 GGGTGACGCCGCGCTGCCCCATATATTTGCCGGCGCGATCGGCGTAGCTGATCTCGCACG 13491
Query 35512 CCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCG 35571
||||| | | | ||||| | ||| | || ||||| ||||| | ||||
Sbjct 13492 GCTCGTTGCCTTGCAGGAACAGGAACTGGCAGGCGCCCTCGTTGGCGTAGATCTTTGCCG 13551
Query 35572 GCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCG 35631
| || ||| |||||| ||| ||||| |||||||| || ||||| | || |||||||
Sbjct 13552 GGAGCGGGGTGGTGTTGGAGAATTCCAGCGTCACATGGCCCTCCCAGCCGGGCTCCAGCG 13611
Query 35632 GCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGA 35691
| || ||||| |||||||| || |||||||| ||||| || || | || | || |
Sbjct 13612 GGGTGACGTTCACGATGATGCCGCAGCGCGCATAGGTCGATTTGCCGAGGCAGATGACCA 13671
Query 35692 GGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCG 35751
| |||| ||||| | |||||| ||||| |||||||| ||||| ||||||||||| ||||
Sbjct 13672 GCACGTCACGCGGCACGCGGAAATATTCCACCGTGCGGGCCAGCGCGAAGCTGTTTGGCG 13731
Query 35752 GAAT 35755
| ||
Sbjct 13732 GGAT 13735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825880862295240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |