Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq2277 230 4e-55 seq3075 147 4e-30 >seq2277 Length=5225 Score = 230 bits (254), Expect = 4e-55 Identities = 335/468 (72%), Gaps = 4/468 (1%) Strand=Plus/Minus Query 35465 CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCACTCTC 35524 |||||||||||| || |||||||| |||||||| | | |||||| ||||||| ||||| Sbjct 3598 CTGGCCCTGGTACTTGCCGCCGCGGTCCTTGTAGCTGGTCTCGCAGACCTCGTCGCTCTC 3539 Query 35525 GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGT 35584 ||| ||||| | ||| || |||||| ||| || | || || || || || Sbjct 3538 GAAGAACAGAACCTGGGCGCAGCCTTCGCCCGCATAGATCTTGGCGGGAAGCGGCGTCGT 3479 Query 35585 GTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGAC 35644 |||| ||||||||| ||||| | |||||||| || || || | |||||| |||||||| Sbjct 3478 GTTGGAGAACTCCAGCGTCACGTAGCCTTCCCATTCCGGCTCGAACGGCGTGACGTTGAC 3419 Query 35645 GATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGG 35704 |||||| || ||||| || || |||||||| |||| || | || ||||||||||| Sbjct 3418 GATGATCCCGCAGCGGGCATACGTGCTCTTGCCCAGGCAGATGGTCAGCACGTTGCGCGG 3359 Query 35705 AATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCT 35764 ||||||||||| || | |||||| ||||| ||||||||||| ||||| || | | | Sbjct 3358 GATGCGGAAGTACTCCAGCGTGCGGGCCAGCGCGAAGCTGTTGGGCGGGATGATGCAGAC 3299 Query 35765 GTCAGCCT-TAACCGGCTGCAGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGC 35823 ||| | | || | | | || ||| ||||| ||||| || || ||||| | || Sbjct 3298 GTCGTCGTGGAAGTCGACG-AAGCTCTTCTCGTCGAAATTCTTGGGGTCCACCACCGTGC 3240 Query 35824 TGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCACGTCATAACCATACGAC 35882 ||| ||| |||||||| || | | || ||| ||| || | ||| || ||||| | Sbjct 3239 TGTGGATATTGGTGAACACCTTGAATTCGGGGGC-GCAGCGGATGTCGTAGCCATAGCTC 3181 Query 35883 GAGTTGCCGTACGAGATAACGTGCTGACCGTCGATGTTGCGCACTTGC 35930 ||| ||||| | ||| || || | || |||| | |||||| ||| Sbjct 3180 GAGGTGCCGAAGCTGATCACCCGCCGGCCATCGACCTCGCGCACCTGC 3133 >seq3075 Length=32470 Score = 147 bits (162), Expect = 4e-30 Identities = 215/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGT 35511 |||| || || ||| ||| ||||| ||| ||||||| ||| ||| ||||| Sbjct 13432 GGGTGACGCCGCGCTGCCCCATATATTTGCCGGCGCGATCGGCGTAGCTGATCTCGCACG 13491 Query 35512 CCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCG 35571 ||||| | | | ||||| | ||| | || ||||| ||||| | |||| Sbjct 13492 GCTCGTTGCCTTGCAGGAACAGGAACTGGCAGGCGCCCTCGTTGGCGTAGATCTTTGCCG 13551 Query 35572 GCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCG 35631 | || ||| |||||| ||| ||||| |||||||| || ||||| | || ||||||| Sbjct 13552 GGAGCGGGGTGGTGTTGGAGAATTCCAGCGTCACATGGCCCTCCCAGCCGGGCTCCAGCG 13611 Query 35632 GCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGA 35691 | || ||||| |||||||| || |||||||| ||||| || || | || | || | Sbjct 13612 GGGTGACGTTCACGATGATGCCGCAGCGCGCATAGGTCGATTTGCCGAGGCAGATGACCA 13671 Query 35692 GGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCG 35751 | |||| ||||| | |||||| ||||| |||||||| ||||| ||||||||||| |||| Sbjct 13672 GCACGTCACGCGGCACGCGGAAATATTCCACCGTGCGGGCCAGCGCGAAGCTGTTTGGCG 13731 Query 35752 GAAT 35755 | || Sbjct 13732 GGAT 13735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825880862295240